Pairwise Alignments

Query, 411 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 649 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score = 99.0 bits (245), Expect = 4e-25
 Identities = 83/274 (30%), Positives = 131/274 (47%), Gaps = 21/274 (7%)

Query: 64  GNLFVRFLQQIHEQETMKQKETVSAICDWIDEYRDLNGLVADHIEN---VNSDAQKATED 120
           GNL   FL++          E    +   + E  D +  + D       V  +++K +E 
Sbjct: 342 GNLGQNFLREGSTGIYAAMAEMNDNLRRIVSELNDASRTLGDSSSGMLGVTEESRKNSES 401

Query: 121 ILNHICSLDHAAANFTHYLKDMEFDSQN---MVSSLDEHTLVISNLADSTRS----LMSN 173
             + +     A    TH + D+  ++Q    M S  D H      + + TR     L+ N
Sbjct: 402 QADQLAHTASAMQEMTHTVDDIARNAQRASEMASEADHHAQEGMGVVEDTRRSIMVLVDN 461

Query: 174 IQTERKQVNDVLNRVMGLNEITEVISKIANETNLLALNAAIEAARSGEMGRGFAVVADEV 233
           I      + ++      +  I +VI  IA +TNLLALNAAIEAAR+GE GRGFAVVADEV
Sbjct: 462 ITDVSGIIENLEKETENVGSILDVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEV 521

Query: 234 RHLAQRAGEAASQISEEIESLRAEVTQRFE---VANKESSEQNIKADMMIESVQSLRQSF 290
           R+LA R   +  +I   I  L+AE  +  E   V   E+++ + KA+  I ++ ++  S 
Sbjct: 522 RNLASRTQNSTEEIQALIGRLQAESRRSVESMRVNVTEATQTSEKANKAIAALGAIADSV 581

Query: 291 SSVREL-------SERQITQIMLYNNDLEKNISG 317
            ++R++       +E Q T +   N  +E+ ISG
Sbjct: 582 MAIRDMNHQIAVAAEEQATVVGTINVSVEE-ISG 614