Pairwise Alignments

Query, 411 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score = 94.7 bits (234), Expect = 6e-24
 Identities = 66/219 (30%), Positives = 115/219 (52%), Gaps = 8/219 (3%)

Query: 86  VSAICDWIDEYRDLNGL---VADHIENVNSDAQKATEDILNHICSLDHAAANFTHYLKDM 142
           V ++ D +D  R L+     VA    +  +  Q+ T+ +   I  +   A+      +  
Sbjct: 276 VISVRDSVDHSRQLSSSLSNVAHQAAHATNSMQQETQSVAAAINQMSATASEVAANAQLA 335

Query: 143 EFDSQNMVSSLDEHTLVISNLADSTRSLMSNIQTERKQVNDVLNRVMG-LNEITEVISKI 201
              ++N  S  D   LV+++   + R L S ++ E  ++   L    G + +I +VI  I
Sbjct: 336 AKSAKNADSQADSTNLVVTHAMGNVRQLSSELE-ETSEIAKALKVSSGEIGQILDVIVGI 394

Query: 202 ANETNLLALNAAIEAARSGEMGRGFAVVADEVRHLAQRAGEAASQISEEIESLRA---EV 258
           A +TNLLALNAAIEAAR+GE GRGFAVVADEVR LA R  ++  +I+  IE++R    +V
Sbjct: 395 AEQTNLLALNAAIEAARAGEAGRGFAVVADEVRTLASRTQQSTQEINAIIEAIRGAVDKV 454

Query: 259 TQRFEVANKESSEQNIKADMMIESVQSLRQSFSSVRELS 297
                 A ++S     +   +++++  ++Q+   + +++
Sbjct: 455 NASVARARQQSDNTVDETAQVMDALGLIKQAIGQINDMN 493