Pairwise Alignments

Query, 411 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 648 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  112 bits (279), Expect = 4e-29
 Identities = 67/189 (35%), Positives = 105/189 (55%), Gaps = 1/189 (0%)

Query: 99  LNGLVADHIENVNSDAQKATEDILNHICSLDHAAANFTHYLKDMEFDSQNMVSSLDEHTL 158
           LN L    + +  +  Q+ TE +   I  +    A  +     +  D+ + VS +   + 
Sbjct: 387 LNSLSQQTVTHAEAQQQQ-TEQVATAINQMGQTIAEVSSVAHRIAADTSSAVSDVHNTSN 445

Query: 159 VISNLADSTRSLMSNIQTERKQVNDVLNRVMGLNEITEVISKIANETNLLALNAAIEAAR 218
           V+ NLA +   L +++   +  VND+  +   +N + EVIS I+ +TNLLALNAAIEAAR
Sbjct: 446 VMLNLAATMEKLSASMNGTQSTVNDLATQAESINSVVEVISSISEQTNLLALNAAIEAAR 505

Query: 219 SGEMGRGFAVVADEVRHLAQRAGEAASQISEEIESLRAEVTQRFEVANKESSEQNIKADM 278
           +GEMGRGFAVVADEVR LA R  ++ S+I  +IE L+  V    +     + + ++ A  
Sbjct: 506 AGEMGRGFAVVADEVRTLASRTQDSTSEIRTQIEKLQQAVGLTRQAVGDAAKQSSLLATD 565

Query: 279 MIESVQSLR 287
            IE+  +L+
Sbjct: 566 AIEATGALK 574