Pairwise Alignments

Query, 411 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 548 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score = 94.7 bits (234), Expect = 6e-24
 Identities = 70/227 (30%), Positives = 119/227 (52%), Gaps = 9/227 (3%)

Query: 81  KQKETVSAICDWIDEYRDLNGLVAD---HIENVNSDAQKATEDILNHICSLDHAAANFTH 137
           K +  V+++   +   R+L   +AD       V ++ Q  T+ +   I  +  A++    
Sbjct: 265 KIQALVNSVSASVTHSRELAEGLADISAQASMVTANMQAETQSVATAINEMSMASSEVAS 324

Query: 138 YLKDMEFDSQNMVSSLDEHTLVISNLADSTRSLMSNIQTERKQVNDVLNRVMGLNEITEV 197
             +     + +     D+   V+       + L + ++    +   +      + +I +V
Sbjct: 325 NAQLAADSAGSADGEADDTVAVVDGAVAKIKGLSNELEVTADEAQALQISSGKIGQILDV 384

Query: 198 ISKIANETNLLALNAAIEAARSGEMGRGFAVVADEVRHLAQRAGEAASQISEEIESLRAE 257
           I  IA +TNLLALNAAIEAAR+GE GRGFAVVADEVR LA R  E+  +I+  IE++RA 
Sbjct: 385 IVGIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRTLASRTQESTQEINAIIEAIRAS 444

Query: 258 V-TQRFEVAN-KESSEQNI-KADMMIESVQSLRQSFSSVRELSERQI 301
           V +    VA  K  SEQ + +   ++E++Q+++   SS+R++S+  I
Sbjct: 445 VDSVNASVARAKAQSEQTVGETSQVVEALQTIK---SSIRQISDMNI 488