Pairwise Alignments

Query, 411 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 543 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 92.8 bits (229), Expect = 2e-23
 Identities = 76/286 (26%), Positives = 129/286 (45%), Gaps = 42/286 (14%)

Query: 64  GNLFVRFLQQIHEQETMKQKETVSAICDWIDEYRDLNGLVADHIENVNSDAQKATEDILN 123
           GN  +  LQ          KET++ +    +E       ++   + V + ++   +    
Sbjct: 242 GNDELTKLQHSMASTRKSLKETINTVLHISEELGSSAAQLSSAAQQVMTSSEMQAQATAC 301

Query: 124 HICSLDHAAANFTHYLKDMEFDSQNMVSSLDEHTLVISNLADSTRSLMSNIQTERKQVND 183
              S++  + +          DS N   S +E  +   NLA      +  +  E + V D
Sbjct: 302 SAASIEEMSTSIAQLS-----DSAN---SANEQAMTSGNLAQQGEHQVEGVSREVRAVTD 353

Query: 184 VLNR-----------VMGLNEITEVISKIANETNLLALNAAIEAARSGEMGRGFAVVADE 232
            +N+           V  + +IT +I  +A++TNLLALNAAIEAAR+G+MGRGFAVVADE
Sbjct: 354 AINQSTTQIRQLADDVTKVGQITVMIKGVADQTNLLALNAAIEAARAGDMGRGFAVVADE 413

Query: 233 VRHLAQRAGEAASQISEEIESLRAEVTQRFEVANK-------------ESSEQNIKADMM 279
           VR LA+R  +A  +I   I S++++  +     +K             ++S+   K D  
Sbjct: 414 VRQLAERTTKATQEIDSMISSVQSKAMETVSTMDKYVQSIENVRLNTAQASDLMAKVDQS 473

Query: 280 IESVQSLRQSF-------SSVRELSERQITQIMLYNNDLEKNISGS 318
            ++V  L           SS  +L  + + ++   NN  ++N+S S
Sbjct: 474 SQAVVGLMGEINVMLHEQSSASQLIAQSVEEV---NNMSQENVSAS 516