Pairwise Alignments

Query, 411 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 523 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score = 90.1 bits (222), Expect = 1e-22
 Identities = 76/253 (30%), Positives = 126/253 (49%), Gaps = 17/253 (6%)

Query: 99  LNGLVADHIENVNSDAQKATEDILNHICSLDHAAANFTHYLKDMEFDSQNMVSSLDEHTL 158
           LN  +  + E+ ++ A  A++  L+H  +L     N TH L   +   +  V    +   
Sbjct: 98  LNKSIESNGEHASAIAVAASQ--LSHTTAL--LGDNATHILGQTQEAERLSVQGRTQAQK 153

Query: 159 VISNLADSTRSLMSNIQTERKQVNDVLNRVMGLNEITEVISKIANETNLLALNAAIEAAR 218
            +S +     SL  +I T  +QV  + ++   + +ITEVI+ +A +TNLLALNAAIEAAR
Sbjct: 154 GVSAI----ESLSGDINTAAQQVQALKSKAEQIQKITEVINSVAEQTNLLALNAAIEAAR 209

Query: 219 SGEMGRGFAVVADEVRHLAQRAGEAASQISEEIESLRAEVTQRFEVANKESSEQNIKADM 278
           +GE GRGFAVVADEVR LA +   A   I + +  +RAE  +   +  +  S+    AD+
Sbjct: 210 AGEQGRGFAVVADEVRSLAGKTAGATKDIGKMLLEIRAETDKTSGLMERVVSQ---TADV 266

Query: 279 MIESVQSLRQSFSSVRELSERQITQIMLYNNDLEKNISG-SMACTQFQDIVRQKLDSIEA 337
           ++ ++ +L   F+ +       +T       D+E ++   +    +    V Q  DS+  
Sbjct: 267 VM-AMGTLDGHFTDI----STSVTHSARALGDMEDSLKQYNHTTNEISGSVSQIRDSLNV 321

Query: 338 LMREKHLLVGDVF 350
             ++ H L    F
Sbjct: 322 TGKQSHKLSEQAF 334