Pairwise Alignments

Query, 504 a.a., cryptochrome-like protein cry2 from Vibrio cholerae E7946 ATCC 55056

Subject, 488 a.a., deoxyribodipyrimidine photo-lyase, 8-HDF type from Synechocystis sp000284455 PCC 6803

 Score =  108 bits (269), Expect = 6e-28
 Identities = 107/436 (24%), Positives = 184/436 (42%), Gaps = 34/436 (7%)

Query: 6   LVWLKRDLRLTDHAPLQAALTSGRPTLLLYLFEPMLLGDAHYSERHWRFVWQSLQAINRD 65
           L+W +RDLRL DH  L  A       + ++  +  +L     +     ++   LQ++   
Sbjct: 20  LLWHRRDLRLNDHLALAKARQKTAKIVGVFCLDNKILQAEDMAPARVAYLLGCLQSLQDH 79

Query: 66  LAQSKGEVLIVTSDWQTCFARIAERYAIEAIYSHQEVGLACTFQRDLALAQWCQQHDIV- 124
             +   E+L+  +D      ++A       +    +       +RDLA+AQ  ++  +  
Sbjct: 80  YQRLGSELLVFQADPVQLLPKLANTLGAHGVTWTLDTEPYAQ-KRDLAVAQALRERGLAI 138

Query: 125 ---WHEF---PYAAVIRGAQTRKNWDEHWQQVMRSPCCDP--------DLTRANWLKL-- 168
              W +    P   + +       +   W+   + P   P         LT A   KL  
Sbjct: 139 ATEWDQLMHHPGEVLTQAGSPYTVYTPFWKNWSQLPKTSPVPTPKDLQGLTPAEKEKLAP 198

Query: 169 -DAATLGLRSDIPATWQSKQAGMQTGGSDMAWATLEDFFARRGREYYRSISSPSLARHAC 227
            +   +   +D+   W   Q    T G + A   L+ F A    EY ++ + P+L     
Sbjct: 199 LEPLAIPQLADLGFIWD--QPLPLTPGEEAAEQRLDWFVAHGLEEYQQNRNFPAL--DGT 254

Query: 228 SRMSPYLAWGNISLREMYQTLLKHWSVAGF---RRSLIALSSRLHWHCHFIQKFESECEM 284
           S++S  L +G IS R ++QT L+ W  +     R S+      L W     ++F   C  
Sbjct: 255 SQLSAALKFGVISPRTLWQTTLEAWEQSRSEEARASIETWQQELAW-----REFYQHCLY 309

Query: 285 EFRCVNRA-YDSLLQQSS-DAPAAQLAAWQTGHTGIPLVDACMRCLIQTGYLNFRMRAML 342
            F  + +  Y S  Q+   +       AW  G TG P++DA M  L QTG+++ R R ++
Sbjct: 310 SFPALAQGPYRSPFQEFPWEENQDHFQAWCEGRTGYPIIDAAMAQLNQTGWMHNRCRMIV 369

Query: 343 VSVLTHHMNVDWRAGVTYLAQLFLDFEPGIHYPQFQMQAGV-TGTNTIRIYNPTKQAQEH 401
            S L   + ++W+ G  Y  Q   D +   +   +Q  A        +RI+NP  QAQ+ 
Sbjct: 370 ASFLIKDLILNWQWGELYFMQTLYDGDLAANNGGWQWSASSGMDPKPLRIFNPHTQAQKF 429

Query: 402 DSEGQFIHKWVPELAQ 417
           D EG++I  W+P+LA+
Sbjct: 430 DPEGEYIRTWLPQLAR 445