Pairwise Alignments

Query, 504 a.a., cryptochrome-like protein cry2 from Vibrio cholerae E7946 ATCC 55056

Subject, 489 a.a., DASH family cryptochrome from Synechocystis sp000284455 PCC 6803

 Score =  144 bits (362), Expect = 9e-39
 Identities = 122/483 (25%), Positives = 210/483 (43%), Gaps = 39/483 (8%)

Query: 6   LVWLKRDLRLTDHAPLQAALTSGRPTLLLYLFEPMLLGDAHYSERH---WR--FVWQSLQ 60
           LVW + DLRL DH PL  AL SG     +Y ++P      H        WR  F+ QS+Q
Sbjct: 9   LVWFRNDLRLHDHEPLHRALKSGLAITAVYCYDPRQFAQTHQGFAKTGPWRSNFLQQSVQ 68

Query: 61  AINRDLAQSKGEVLIVTSDWQTCFARIAERYAIEAIYSHQEVGLA-CTFQRDL------- 112
            +   L +   ++L+ T   +    +IA++   + IY H+EV       +R+L       
Sbjct: 69  NLAESLQKVGNKLLVTTGLPEQVIPQIAKQINAKTIYYHREVTQEELDVERNLVKQLTIL 128

Query: 113 ---ALAQW----CQQHDIVWHEFPYAAV-IRGAQTRKNWDEHWQQVMRSPC--CDPDLTR 162
              A   W    C   D+     P++   +    T+   D   +++   PC      L  
Sbjct: 129 GIEAKGYWGSTLCHPEDL-----PFSIQDLPDLFTKFRKDIEKKKISIRPCFFAPSQLLP 183

Query: 163 ANWLKLDAATLGLRSDIPATWQSKQAGMQTGGSDMAWATLEDFFARRGR-EYYRSISSPS 221
           +  +KL+             +  +      GG     A L+D+F    R + Y+   +  
Sbjct: 184 SPNIKLELTAPPPEFFPQINFDHRSVLAFQGGETAGLARLQDYFWHGDRLKDYKETRNGM 243

Query: 222 LARHACSRMSPYLAWGNISLREMYQTLLKHWSVAGFRRSLIALSSRLHWHCHF---IQKF 278
           +     S+ SP+LA G +S R +YQ + ++        S   L   L W   F    QK+
Sbjct: 244 VGADYSSKFSPWLALGCLSPRFIYQEVKRYEQERVSNDSTHWLIFELLWRDFFRFVAQKY 303

Query: 279 ESECEMEFRCVNRAYDSLLQQSSDAPAAQLAAWQTGHTGIPLVDACMRCLIQTGYLNFRM 338
            ++       +N+ +     Q       +   W++G TG PLVDA MR L  TG+++ R 
Sbjct: 304 GNKLFNRGGLLNKNFPWQEDQ------VRFELWRSGQTGYPLVDANMRELNLTGFMSNRG 357

Query: 339 RAMLVSVLTHHMNVDWRAGVTYLAQLFLDFEPGIHYPQFQMQAGV-TGTNTIRIYNPTKQ 397
           R  + S L  ++ +DWR G  +     +D++   ++  +   AG+       R +N  KQ
Sbjct: 358 RQNVASFLCKNLGIDWRWGAEWFESCLIDYDVCSNWGNWNYTAGIGNDARDFRYFNIPKQ 417

Query: 398 AQEHDSEGQFIHKWVPELAQVPVPLLFEPWLMTPLEAQMYQVPLESPYLKPVMDLEASAK 457
           +Q++D +G ++  W+PEL  +P   + +PWL++  E + + V L   Y +P ++   S +
Sbjct: 418 SQQYDPQGTYLRHWLPELKNLPGDKIHQPWLLSATEQKQWGVQLGVDYPRPCVNFHQSVE 477

Query: 458 QAR 460
             R
Sbjct: 478 ARR 480