Pairwise Alignments

Query, 504 a.a., cryptochrome-like protein cry2 from Vibrio cholerae E7946 ATCC 55056

Subject, 431 a.a., deoxyribodipyrimidine photolyase from Pedobacter sp. GW460-11-11-14-LB5

 Score =  120 bits (302), Expect = 7e-32
 Identities = 104/422 (24%), Positives = 198/422 (46%), Gaps = 28/422 (6%)

Query: 1   MEKINLVWLKRDLRLTDHAPLQAALTSGRPTLLLYLFEPMLLGDAHYSERHWRFVWQSLQ 60
           M  I+++W +RDLRLTD+A L  AL S  P L L++F+  +L      +    F+ Q+++
Sbjct: 1   MTSISILWFRRDLRLTDNAALYHALKSDYPVLPLFIFDQHILDKLPKDDARVTFIHQTIE 60

Query: 61  AINRDLAQSKGEVLIVTSDWQTCFARIAERYAIEAIYSHQEVGLACTFQRDLALAQWCQQ 120
            +   L     ++L+     +  +  I + Y ++ +Y++ +       +RD  ++++   
Sbjct: 61  DLKEALRLHGSDLLVKYGKPEKIWPEILKEYDVKGVYTNHDYEPYAR-ERDDNMSEFLTS 119

Query: 121 HDIVWHEFPYAAVIRGAQTRKNWDEHWQQVMRSPCCDPDLTRANWLKLDAATLGLRSDIP 180
             I +  +    +    +  K   +H    + +P       + N   + A     +    
Sbjct: 120 EKIAFKTYKDQVIFEKNEILKA--DHTPYTVFTPFYKQWHAKLNDFYVKAYPT--KKYFK 175

Query: 181 ATWQSKQAGMQTGGSDMAWATLE-DF----FARRGREYYRSISSPSLARHACSRMSPYLA 235
              QSK      G ++M +   + DF    +  +  +Y +    P+L     + +  +L 
Sbjct: 176 NLLQSKHLPCP-GLNEMGFEKSKLDFPKISYKSKLDDYAKERDFPAL--DGTTHIGLHLR 232

Query: 236 WGNISLREMYQTLLKHWSVAGFRRSLIALSSRLHWHCHFIQKFESECEMEFRCVNRAYDS 295
           +G +S+R+  +  L+        +S + LS  L W   ++          F    + YD 
Sbjct: 233 FGTLSIRKAVKDALE-------AKSNVWLSE-LAWREFYMTILWHFPYSAFDSFKKQYDK 284

Query: 296 LLQQSSDAPAAQLAAWQTGHTGIPLVDACMRCLIQTGYLNFRMRAMLVSVLTHHMNVDWR 355
           +  ++++    +  AW  G+TG P+VDA MR L QTG+++ R+R ++ S LT H+ +DWR
Sbjct: 285 IKWRNNED---EFKAWCEGNTGYPIVDAGMRQLNQTGWMHNRVRMIVGSFLTKHLLIDWR 341

Query: 356 AGVTYLAQLFLDFEPGIHYPQFQMQAGVTGTNT---IRIYNPTKQAQEHDSEGQFIHKWV 412
            G TY A+  LD+E   +   +Q  AG +G +     R++NP  Q ++ D + ++I KWV
Sbjct: 342 WGETYFAEKLLDYEMASNVGGWQWAAG-SGNDAAPYFRVFNPELQTKKFDPKFEYIKKWV 400

Query: 413 PE 414
           PE
Sbjct: 401 PE 402