Pairwise Alignments

Query, 504 a.a., cryptochrome-like protein cry2 from Vibrio cholerae E7946 ATCC 55056

Subject, 424 a.a., deoxyribodipyrimidine photolyase from Pedobacter sp. GW460-11-11-14-LB5

 Score = 57.4 bits (137), Expect = 1e-12
 Identities = 42/185 (22%), Positives = 78/185 (42%), Gaps = 3/185 (1%)

Query: 228 SRMSPYLAWGNISLREMYQTLLKHWSVAGFRRSLIALSSRLHWHCHFIQKFESECEMEFR 287
           S++S +LA G++S R++Y  + K   V   +     +   L W  +F   F+      F 
Sbjct: 240 SKLSAWLAMGSLSPRKVYWEIKKMEGVPNTKAMFNHILLGLLWRDYFRFMFKKYGNTFFS 299

Query: 288 CVNRAYDSLLQQSSDAPAAQLAAWQTGHTGIPLVDACMRCLIQTGYLNFRMRAMLVSVLT 347
                   L+   ++        W+   TG  +VDA M  L QTG+++   R      L 
Sbjct: 300 PDGFGSQGLIDIVNEQD--NFNKWKNAQTGFAVVDAVMTELNQTGFISNIARQTAALYLI 357

Query: 348 HHMNVDWRAGVTYLAQLFLDFEPGIHYPQFQMQAGVTGTNTIR-IYNPTKQAQEHDSEGQ 406
           +++ V W  G  Y  +  +D+ P  ++  +   AGV      + +++  K  +  D +G 
Sbjct: 358 NNLEVSWIFGAAYFEEKLIDYNPASNWGNWANVAGVGNDQKSKSVFDLDKNIKNLDPKGN 417

Query: 407 FIHKW 411
           +   W
Sbjct: 418 YSLTW 422



 Score = 51.6 bits (122), Expect = 5e-11
 Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 5/107 (4%)

Query: 1   MEKINLVWLKRDLRLTDHAPLQAALTSGRPTLLLYLFEPMLLGDAHY-----SERHWRFV 55
           M K  LVW + DLRL D+  L  A+      L +Y+ +    G+  Y          +F+
Sbjct: 1   MSKKILVWFRNDLRLHDNEMLVEAIAKSDSILPVYILDRRSFGETKYGTLKTGNIRAQFI 60

Query: 56  WQSLQAINRDLAQSKGEVLIVTSDWQTCFARIAERYAIEAIYSHQEV 102
            +S+  +   L Q  G +LI   + +    ++A+ Y I  +Y H+EV
Sbjct: 61  LESVLGLRNSLKQIGGNLLIAEGNPEDIIPQLAQEYEITEVYHHREV 107