Pairwise Alignments

Query, 504 a.a., cryptochrome-like protein cry2 from Vibrio cholerae E7946 ATCC 55056

Subject, 482 a.a., deoxyribodipyrimidine photolyase from Dechlorosoma suillum PS

 Score =  150 bits (378), Expect = 1e-40
 Identities = 135/482 (28%), Positives = 210/482 (43%), Gaps = 67/482 (13%)

Query: 6   LVWLKRDLRLTDHAPLQAALTSGRPTLLLYLFEPMLLGDAH-YSERHWRFVWQSLQAINR 64
           LVW +RDLR  DHA L  AL S R     ++F+  +L      S+R   F+ +SL  ++ 
Sbjct: 6   LVWFRRDLRDYDHAALYHALKSARRVWCAFVFDSDILEALPGRSDRRVEFIRESLAELHV 65

Query: 65  DLAQSKGEVLIVTSDWQTCFARIAERYAIEAIYSHQEVGLACTFQRDLALAQWCQQHDIV 124
            L    G +++         A +A +  + A++++++        RD A+A   ++  I 
Sbjct: 66  ALQAKGGGLMVRHGPAAAEIAALARQLGVVAVFANRDYEPRAK-ARDAAVAADLERDGIA 124

Query: 125 WHEFPYAAVIRGAQTRKN----------WDEHWQQVMR----------------SPCCD- 157
            H F   AV  G +              +   W   +                 +P  D 
Sbjct: 125 LHLFKDQAVFDGDEVLTKGGTPYTVFTPYKNCWLGKLEDFHVRPYPVDRYSGHLAPPPDG 184

Query: 158 ---PDLTRANWLKLDAATLGL---RSDIPATWQSKQAGMQTGGSDMAWATLEDFFARRGR 211
              P L    +L  D   +G+    S   A WQ  +  ++       +A   DF A +G 
Sbjct: 185 GGVPSLADIGFLPTDLERIGVVPGMSGGAARWQDFRQRLER------YAEQRDFPAVKGV 238

Query: 212 EYYRSISSPSLARHACSRMSPYLAWGNISLREMYQTLLKHWSVAGFRRSLIALSSRLHWH 271
            Y                +S YL +G +S+R++     + W   G         S L W 
Sbjct: 239 SY----------------LSVYLRFGCLSIRQLAG---EAWRSGG--PGAATWLSELIWR 277

Query: 272 CHFIQKFESECEMEFRCVNRAYDSLLQQSSDAPAAQLAAWQTGHTGIPLVDACMRCLIQT 331
             +    +   ++   C    +D +L    +APA  LAAW+ G TG PLVDA MR L QT
Sbjct: 278 DFYFMVLDRFPQLPDGCFKPEFDRVLWD--EAPAL-LAAWREGRTGYPLVDAAMRQLAQT 334

Query: 332 GYLNFRMRAMLVSVLTHHMNVDWRAGVTYLAQLFLDFEPGIHYPQFQMQA--GVTGTNTI 389
           G+++ R+R ++ S LT  + +DWR G  + A L LDF+   +   +Q  A  G       
Sbjct: 335 GWMHNRLRMVVASFLTKDLGLDWRLGEGHFADLLLDFDLSANNGGWQWAASTGCDAQPWF 394

Query: 390 RIYNPTKQAQEHDSEGQFIHKWVPELAQVPVPLLFEPWLMTPLEAQMYQVPLESPYLKPV 449
           RI+NP  Q+++ D +G+FI ++VPELA VP   +  PW M PLE Q   V +   Y  PV
Sbjct: 395 RIFNPVTQSEKFDPQGRFIRRYVPELAGVPDKHIHAPWRMAPLEQQAAGVIIGRDYPAPV 454

Query: 450 MD 451
           +D
Sbjct: 455 VD 456