Pairwise Alignments

Query, 504 a.a., cryptochrome-like protein cry2 from Vibrio cholerae E7946 ATCC 55056

Subject, 467 a.a., deoxyribodipyrimidine photolyase from Marinobacter adhaerens HP15

 Score =  127 bits (318), Expect = 1e-33
 Identities = 114/478 (23%), Positives = 203/478 (42%), Gaps = 47/478 (9%)

Query: 6   LVWLKRDLRLTDHAPLQAALTSGRPTLLLYLFEPMLLGDAHYSERHWRFVWQSLQAINRD 65
           LVW + DLR+ D+  L AA  S       ++  P    +  +S    +FV     A+  +
Sbjct: 4   LVWFRNDLRVADNPALTAACESSEEVRACFILTPDQWQEHDWSPARVQFVVAHANALAEE 63

Query: 66  LAQSKGEVLIVTSD-WQTCFARI---AERYAIEAIYSHQEVGLACTFQRDLALAQWCQQH 121
           LA+    +  + +  +     ++    E + + A++ ++E G+    +RD AL     Q 
Sbjct: 64  LAKLGIPLSFIQAKRFDDSLGKLESHCEEHGVTALHFNEEYGVN-ERKRDKALKHRFDQL 122

Query: 122 DIVWHEF-----------------PYAAVIRGAQTRKNWDEHWQQVMRSPCCDPDLTRAN 164
            I   ++                 PY+     ++  ++W E            P L    
Sbjct: 123 GIAVRKYRDQTVAPVGEILTQQNDPYSVFTPFSRRWRSWIEETH---------PGLFPTP 173

Query: 165 WLKLDAATLGLRSDIPATWQSKQAGMQTGGSDMAWATLEDFFARRGREYYRSISSPSLAR 224
             + +A +      IP  ++     +   G D A   LE F  +RG  Y      P++  
Sbjct: 174 KARGNAVSPEQIDAIPEAFRDAPEPLVATGEDAAHDQLERFLEKRGGAYKEKRDFPAI-- 231

Query: 225 HACSRMSPYLAWGNISLREMYQTLLKHWSVAGFRRSLIALSSRLHWHCHFIQKFESECEM 284
              S++SPYLA G +S R+      +     G +  L    + + W   +I        +
Sbjct: 232 DGTSQISPYLANGVLSGRQCLIAGRQAQGAGGNQEGLGTWITEIAWRDFYINILYHFPRV 291

Query: 285 EFRCVNRAYDSLLQQSSDAPAAQLAAWQTGHTGIPLVDACMRCLIQTGYLNFRMRAMLVS 344
                 +     L+ ++  P  +  AW+TG+TG+P+VDA MR L QTG+++ R+R +   
Sbjct: 292 SMHRAFKPETETLEWNN--PGDRFEAWKTGNTGVPIVDAAMRQLNQTGWMHNRLRMITAM 349

Query: 345 VLTHHMNVDWRAGVTYLAQLFLDFEPGIHYPQFQMQAGVTGTNT---IRIYNPTKQAQEH 401
            LT ++ +DWR G  Y     +D     +   +Q  A  TGT+     R++NP  Q++  
Sbjct: 350 YLTKNLFIDWRLGEAYFMSKLIDGFLASNNGGWQWSAS-TGTDAAPYFRVFNPVTQSERF 408

Query: 402 DSEGQFIHKWVPELAQVPVPLLFEPWLMTPLEAQMYQVPLESPYLKPVMDLEASAKQA 459
           D +G FI +WVPELA++    + +P     +        +   Y + ++DL+ S K+A
Sbjct: 409 DPDGDFIREWVPELAKLDSKRIHDPGAKGGV--------IPKGYPRQIVDLKESRKEA 458