Pairwise Alignments

Query, 504 a.a., cryptochrome-like protein cry2 from Vibrio cholerae E7946 ATCC 55056

Subject, 440 a.a., deoxyribodipyrimidine photolyase from Marinobacter adhaerens HP15

 Score =  116 bits (290), Expect = 2e-30
 Identities = 110/422 (26%), Positives = 180/422 (42%), Gaps = 21/422 (4%)

Query: 6   LVWLKRDLRLTDHAPLQAALTSGRPTLLLYL-----FEPMLLGDAHYSERHWRFVWQSLQ 60
           L W  RDLRL D+A L AA  S    L LY+     F P  L      +  WRF+WQSL 
Sbjct: 4   LYWFTRDLRLHDNASLLAASKSDM-LLCLYVVDPRWFAPGPLQSKAMGDHRWRFLWQSLM 62

Query: 61  AINRDLAQSKGEVLIVTSDWQTCFARIAERYAIEAIYSH-----QEVGLACTFQRDLALA 115
           A+ R L      + I   + +T   ++A  ++IE +        QE G     +  L  A
Sbjct: 63  ALERSLRPLGQRLHIAFGEPETVIPQLAHAHSIERVVRSRLPGTQEAGQWQAIKDRLPKA 122

Query: 116 QWCQQHDIVWHEFPYAAVIRGAQTRKNWDEHWQQVMRSPCCDPDLTRANWLKLDAATLGL 175
            + QQ + +      +  +   +    + +  +QV ++     +  R   L       G 
Sbjct: 123 VF-QQFETLSLFTEGSLPMALEELPDTFSQFRKQVEKTGDRCSERLRIRTLTALPPPPGF 181

Query: 176 ----RSDIPATWQSKQAGMQTGGSDMAWATLEDF-FARRGREYYRSISSPSLARHACSRM 230
               R D P   +        GG     A L++F +     + Y+   +      A S+ 
Sbjct: 182 PEDNRGDCPPIPEPVHPLQFMGGEAAGLARLQEFLYGNHSIDRYKETRNALDTWDASSKF 241

Query: 231 SPYLAWGNISLREMYQTLLKHWSVAGFRRSLIALSSRLHWHCHFIQKFESECEMEFRCVN 290
           SP+LA G +S+RE+ +T+ ++ +      S   L   L W  +F           FR   
Sbjct: 242 SPWLANGCLSVREVAETITEYEASETKNESTYWLWFELLWREYFYWYALKHGANLFR--- 298

Query: 291 RAYDSLLQQSSDAPAAQLAAWQTGHTGIPLVDACMRCLIQTGYLNFRMRAMLVSVLTHHM 350
           R      ++       +  AW  G+T  P+V+A M  L +TGY++ R R ++ S   + +
Sbjct: 299 RDGVQRKRRHGTFYGHRFKAWCQGNTEYPIVNAAMNQLRETGYMSNRARQLVASCFINEL 358

Query: 351 NVDWRAGVTYLAQLFLDFEPGIHYPQFQMQAGV-TGTNTIRIYNPTKQAQEHDSEGQFIH 409
            +DWR G  +  +  +D++ G +Y  +Q  AGV      +R +N  KQ Q++D  G FI 
Sbjct: 359 GLDWRYGAAWFEEQLIDYDVGSNYGNWQYLAGVGADPRGLRQFNLEKQTQQYDPTGTFID 418

Query: 410 KW 411
           +W
Sbjct: 419 RW 420