Pairwise Alignments

Query, 504 a.a., cryptochrome-like protein cry2 from Vibrio cholerae E7946 ATCC 55056

Subject, 483 a.a., deoxyribodipyrimidine photolyase from Caulobacter crescentus NA1000

 Score =  106 bits (265), Expect = 2e-27
 Identities = 127/492 (25%), Positives = 204/492 (41%), Gaps = 73/492 (14%)

Query: 6   LVWLKRDLRLTDHAPLQAALTSGRPTLLLYLFE------PMLLGDAHYSERHWRFVWQSL 59
           +VW ++DLR+ D+  L+ A  SGRP + LY+ +      PM      + ++  + +  SL
Sbjct: 18  IVWFRKDLRIADNPALRHAAQSGRPVIPLYILDETPGIRPMGGASLWWLDKSLKSLAASL 77

Query: 60  QAINRDLAQSKGEVLIVTSDWQTCFARIAERYAIEAIYSHQEVGLACTFQRDLALAQWCQ 119
           + +   L   KG    V          IA+  A   +++   +    +  RD A+    +
Sbjct: 78  ETLGTKLVLRKGVAAEVLDQL------IAQSGARSVVWNR--LYDKPSTDRDAAIKAALR 129

Query: 120 QHDIVWHEF-------PYAAVIRGAQTRKNWDEHWQQVMRSPCCDPDLTRANWLKLDAAT 172
              +    F       P+       Q  K +  +W+   R    D  +T A    L A  
Sbjct: 130 DRGVDCQSFNAGLLNEPWTVKNGSDQPYKVFTPYWRAA-REHLTDVAVTAAPG-HLVAPA 187

Query: 173 LGLRSDIPATWQ--------SKQAGMQTGGSDMAWATLEDFFARRGREYYRSISSPSLAR 224
               S+  A+W         SK   + T G   A A L+ F     + Y      P +  
Sbjct: 188 RFPASESLASWNLHPTKPDWSKGFDLWTPGEAGAHARLDAFLKGPIKGYGDQRDIPGV-- 245

Query: 225 HACSRMSPYLAWGNISLREMYQTLLKHWSVAGFRRSLIALSSRLHWHCHFIQKFESECEM 284
            A S++SP+L +G I  R+++   L   S A   +  I L+           KF SE  +
Sbjct: 246 EATSKLSPHLHFGEIGPRQVW---LATRSAAD--QGDIPLAEA--------DKFLSE--I 290

Query: 285 EFRCVNRAYDSLLQQSSDAPAAQ----------------LAAWQTGHTGIPLVDACMRCL 328
            +R  N    S+L      P+A                 L AW+ G TG P+VDA MR L
Sbjct: 291 GWREFNH---SILYNWPHMPSANFKPEFDGFPWVKDEGALEAWKRGQTGYPIVDAGMREL 347

Query: 329 IQTGYLNFRMRAMLVSVLTHHMNVDWRAGVTYLAQLFLDFEPGIHYPQFQMQA--GVTGT 386
             TG+++ R+R ++ S L  H+ +DWR G  +     LD +   +   +Q  A  G    
Sbjct: 348 WTTGFMHNRVRMIVASFLIKHLMIDWREGEAWFWDTLLDADLANNVGNWQWTAGSGADAA 407

Query: 387 NTIRIYNPTKQAQEHDSEGQFIHKWVPELAQVPVPLLFEPW---LMTPLEA-QMYQVPLE 442
              RI+NP  Q ++ D +G ++ +WVPEL  V   ++ +PW   L  P  A ++Y  P+ 
Sbjct: 408 PYFRIFNPIAQGEKFDPKGDYVRRWVPELRNVSDDVIHKPWTKPLHLPAGAKRLYSRPIV 467

Query: 443 SPYLKPVMDLEA 454
              +     LEA
Sbjct: 468 DHAMARARALEA 479