Pairwise Alignments

Query, 504 a.a., cryptochrome-like protein cry2 from Vibrio cholerae E7946 ATCC 55056

Subject, 518 a.a., deoxyribodipyrimidine photo-lyase from Ralstonia sp. UNC404CL21Col

 Score =  132 bits (333), Expect = 2e-35
 Identities = 113/481 (23%), Positives = 200/481 (41%), Gaps = 31/481 (6%)

Query: 6   LVWLKRDLRLTDHAPLQAALTSGRPTLLLYLFE----PMLLGDAHYSERHWRFVWQSLQA 61
           LVW +RDLR  DHA L  AL   R    +++F+      LL     ++R   F+  S++ 
Sbjct: 21  LVWFRRDLRHFDHAALHYALRHCREVYCVFVFDRDILDALLARGLKADRRIEFIRASIEE 80

Query: 62  INRDLAQSKGEVLIVTSDWQTCFARIAERYAIEAIYSHQEVGLACTFQRDLALAQWCQQH 121
           +   L ++ G++++V    +     +A +  IEA++++ +   +    RD A+ +   Q 
Sbjct: 81  LRSALREAGGDLIVVHDHPRQAIPELARKLNIEAVFANHDEEPSAQ-ARDEAVRKVLAQQ 139

Query: 122 DIVWHEFPYAAVIRGAQTRKN----------WDEHWQQVMRSPCCDPDLTRANWLKLDAA 171
              W +F    +    +              +   W   +         T   +  L   
Sbjct: 140 PCAWFDFKDQVIFERDEILNGQGKPYGVFTPYKNAWLAALTPFDLRAYPTEPYFGALAKP 199

Query: 172 TLGLRSDIPATWQSKQAGMQTGGSDMAWA-------TLEDFFARRGREYYRSISSPSLAR 224
              L    PA         +T  S++A         TL D F  R  +Y+     P++  
Sbjct: 200 PQALTQPTPAL--EAMGFARTNLSEIALPSGMSGGQTLLDEFEERMDDYHARRDFPAV-- 255

Query: 225 HACSRMSPYLAWGNISLREMYQTLLKHWSVAGFRRSLIALSSRLHWHCHFIQKFESECEM 284
              S +S +L +G +S+R +      H ++    R      S L W   +        ++
Sbjct: 256 RGPSYLSTHLRFGTVSIRTL--AARAHAAMLRGSRGAATWLSELVWRDFYFMILHHRPDL 313

Query: 285 -EFRCVNRAYDSLLQQSSDAPAAQLAAWQTGHTGIPLVDACMRCLIQTGYLNFRMRAMLV 343
            +    +  +D +     D   A+  AW+   TG PLVDA M  + Q+GY++ R+R +  
Sbjct: 314 ADGAAFHPEFDRIRWVDGDTGDARFEAWKAARTGYPLVDAAMLQIFQSGYMHNRLRMVAA 373

Query: 344 SVLTHHMNVDWRAGVTYLAQLFLDFEPGIHYPQFQMQA--GVTGTNTIRIYNPTKQAQEH 401
           S L   + +DWR G  Y A +  DF+   +   +Q  A  G       RI+NP  Q+++ 
Sbjct: 374 SFLIKDLGIDWRRGEQYFADVLNDFDFSANNGGWQWAASSGCDAQPWFRIFNPVTQSEKF 433

Query: 402 DSEGQFIHKWVPELAQVPVPLLFEPWLMTPLEAQMYQVPLESPYLKPVMDLEASAKQARD 461
           D +G+FI K++P+LA++P   +  PW       +   + L   Y  P++D   +     D
Sbjct: 434 DPQGRFIRKYLPQLAKLPDKYIHAPWTAPANVLKEAGIVLGETYPLPIVDHATARAATLD 493

Query: 462 R 462
           R
Sbjct: 494 R 494