Pairwise Alignments

Query, 316 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 318 a.a., Transcriptional regulator, LysR family from Pseudomonas fluorescens FW300-N2E2

 Score =  139 bits (351), Expect = 7e-38
 Identities = 93/298 (31%), Positives = 146/298 (48%), Gaps = 9/298 (3%)

Query: 13  KLDDLALFLTVVRCGSFALAAKQKSMSTSTLSRRIQQLEQDTGSILLIRNSKELVLTKEG 72
           ++DDLA F  ++  GSF LAA+Q   S   LS+RI  LE+    +LL R ++ L LT  G
Sbjct: 17  EMDDLAAFAVLMEAGSFTLAAQQLGCSKGQLSKRISLLEKRFSVVLLQRTTRRLSLTAAG 76

Query: 73  EQLFHSYAELFAQIERKQEEVEQAKRDYRGEIAISAPVLPLRHQLTPLALEFAELHPNVT 132
             L      L  Q+ER ++ + + K D  G + ++ PV         L +EFA  +PNV 
Sbjct: 77  AALLPQAQALLVQVERARQALARLKDDISGPVRMTVPVSLGETFFEGLLMEFARTYPNVQ 136

Query: 133 LRMQVGSGLDYFSQRDLDIALRFGPQPESDWVARKLARNPSVLCASAELAAKLSTVTLTL 192
           + +++ +G    S+   D+A+R     +   VAR L     + CAS              
Sbjct: 137 IELELNNGYRDLSRDGFDLAIRSDAAIDERLVARPLLAWHEMTCASPAYLEHYGEPET-- 194

Query: 193 AHPEQLKEHPLLSLNH---KLPWIFHHHSVAQKVQFIPTARLCSDELDTIVQATLQGMGI 249
             P+ L EH  L  +H   +  W++H      +V+   +    S+    + +A L G GI
Sbjct: 195 --PQALAEHRCLLNSHYSGREEWLYHQQHELLRVRV--SGPFASNHYSLLKKAALAGAGI 250

Query: 250 ARLPRGLMEPLLRSGQLIELLPEWEIEGADVYLLHPQRRFLPERTQALIDYIMTHWSR 307
           ARLP  L+   L  G+L  LL +++     +YL+HP +  LP+RTQ L DY++  + R
Sbjct: 251 ARLPSYLLHEELADGRLHWLLRDYQTRRMPMYLVHPYQGGLPKRTQVLADYLIDWFKR 308