Pairwise Alignments

Query, 316 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., LyrR family transcriptional regulator (RefSeq) from Shewanella amazonensis SB2B

 Score =  123 bits (309), Expect = 5e-33
 Identities = 85/289 (29%), Positives = 146/289 (50%), Gaps = 10/289 (3%)

Query: 17  LALFLTVVRCGSFALAAKQKSMSTSTLSRRIQQLEQDTGSILLIRNSKELVLTKEGEQLF 76
           + +F +VV  GS  +AA+   +S S +S+ +++LE+  G  LL R ++ + LT++G + F
Sbjct: 9   MLVFASVVEQGSLTMAAEVLGISRSMVSQHLKKLEERLGCELLHRTTRRISLTEDGREFF 68

Query: 77  HSYAELFAQIERKQEEVEQ-AKRDYRGEIAISAPVLPLRHQLTPLALEFAELHPNVTLRM 135
           H   EL  Q+ R+ E V + A     G + ++APV    H L PL  +F   +PN+ L +
Sbjct: 69  HYCGELL-QLARQAEAVTRPADEHLHGSLRVTAPVGLGEHNLLPLIGDFHRRYPNIRLTL 127

Query: 136 QVGSGLDYFSQRDLDIALRFGPQPESDWVARKLARNPSVLCASAELAAKLSTVTLTLAHP 195
            +        +  +D+A++ G   +S++ A KL      L AS E  A          HP
Sbjct: 128 MLEDSKLNLLEHQIDVAIQAGWPEDSEFRAIKLGSFDEQLVASPEYVAAHGKP----LHP 183

Query: 196 EQLKEHPLLS-LNHKLP--WIFHHHSVAQKVQFIPTARLCSDELDTIVQATLQGMGIARL 252
           + L+ H  L+  +  LP  W   H+   ++ +   T  +  +  + ++   LQG+G+A L
Sbjct: 184 DNLQHHQWLAHASGHLPKTWTL-HNGQGEEFRVRITPFISCNSTNGLIAMALQGLGVAIL 242

Query: 253 PRGLMEPLLRSGQLIELLPEWEIEGADVYLLHPQRRFLPERTQALIDYI 301
           P  L+   L SG L  LLP++ +    VY LHP +   P R +  +D++
Sbjct: 243 PDNLVNEHLASGALELLLPDYHLREGGVYALHPYKENTPPRVRVFLDFL 291