Pairwise Alignments

Query, 316 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 303 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  119 bits (298), Expect = 9e-32
 Identities = 90/290 (31%), Positives = 131/290 (45%), Gaps = 9/290 (3%)

Query: 14  LDDLALFLTVVRCGSFALAAKQKSMSTSTLSRRIQQLEQDTGSILLIRNSKELVLTKEGE 73
           L+ + LF  VVR   F+ AA+   M  ST+SR++ QLE+  G  LL R+++ L LT+ G 
Sbjct: 4   LNGMMLFAAVVRAKGFSQAARNTGMPKSTISRKVAQLEEQLGVRLLQRDTRNLSLTQVGA 63

Query: 74  QLFHSYAELFAQIERKQEEVEQAKRDYRGEIAISAPVLPLRHQLTPLALEFAELHPNVTL 133
             +   + +  +IE  +  +E    D  G + I+ PV   +  +  L   F  L+PNV L
Sbjct: 64  LFYQHCSSISDEIEAAKATIENTHNDVFGSLRIAIPVSFSQELIASLCSSFMRLYPNVDL 123

Query: 134 RMQVGSGLDYFSQRDLDIALRFGPQPESDWVARKLARNPSVLCASAELAAKLSTVTLTLA 193
            +Q             DIA+++GP   SD VAR L     +L AS        T     A
Sbjct: 124 DVQFTDSDVGLVGEGYDIAIKYGPLQSSDLVARLLFERQPILVASPGYLKANGTP----A 179

Query: 194 HPEQLKEHP--LLSLNHKLP-WIFHHHSVAQKVQFIPTARLCSDELDTIVQATLQGMGIA 250
            P+ LKEH   LL  +   P W          V F    R+ S  +  + Q  L   GIA
Sbjct: 180 TPQDLKEHSGILLGTSRSAPIWPLGKGERKTMVNFKRKVRVNSAIM--VKQLVLDDFGIA 237

Query: 251 RLPRGLMEPLLRSGQLIELLPEWEIEGADVYLLHPQRRFLPERTQALIDY 300
            L   + +  L  G L+ LL EW +E   VY ++  RR L       +D+
Sbjct: 238 MLSNSVCKNELAGGSLVPLLQEWPMEPFKVYGVYSSRRQLATNISVFLDF 287