Pairwise Alignments

Query, 316 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 293 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  130 bits (326), Expect = 5e-35
 Identities = 80/287 (27%), Positives = 139/287 (48%), Gaps = 7/287 (2%)

Query: 20  FLTVVRCGSFALAAKQKSMSTSTLSRRIQQLEQDTGSILLIRNSKELVLTKEGEQLFHSY 79
           F+ V     F+ AA+Q  +STS +SR++ +LE   G  L  R ++ + LT+ G+  +   
Sbjct: 10  FIAVAESNGFSAAARQLGLSTSHVSRQVARLEVRLGCALFARTTRSVSLTQAGQGYYRQC 69

Query: 80  AELFAQIERKQEEVEQAKRDYRGEIAISAPVLPLRHQLTPLALEFAELHPNVTLRMQVGS 139
             L   + +  EEV Q +    G + +SA        + P+ ++FA  HP +T+ M   S
Sbjct: 70  QNLLVGLRQANEEVTQQQLQLSGTLRVSAAGAFAEQYIAPVLIDFARQHPALTIEMDFNS 129

Query: 140 GLDYFSQRDLDIALRFGPQPESDWVARKLARNPSVLCASAELAAKLSTVTLTLAHPEQLK 199
            +  F +  +D A+RFG   +S  VARKLA    +  AS +  A+          P+ L+
Sbjct: 130 RMVNFVEEGIDFAIRFGALKDSGLVARKLANRDMMAVASPQYLAEFGIPKT----PQDLR 185

Query: 200 EHPLLSLNHKLPWIFHHHSVAQKVQFIPTARLCSDELDTIVQATLQGMGIARLPRGLMEP 259
            H  +  N+   W+F        ++     R  S+ +  ++ A  Q +GIA LP+     
Sbjct: 186 LHSCIISNND-HWLFQQGDGELSIKV--EGRWRSNNVPAVIAAAEQHLGIAYLPKSSFIA 242

Query: 260 LLRSGQLIELLPEWEIEGADVYLLHPQRRFLPERTQALIDYIMTHWS 306
            L  G L+ +L  +   G   ++++  RRFLP R +  ID+++ H++
Sbjct: 243 PLAKGSLVPVLSSYWNRGITSWIVYQNRRFLPMRARMAIDHLLAHFA 289