Pairwise Alignments

Query, 316 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 297 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  124 bits (310), Expect = 4e-33
 Identities = 89/291 (30%), Positives = 155/291 (53%), Gaps = 12/291 (4%)

Query: 13  KLDDLALFLTVVRCGSFALAAKQKSMSTSTLSRRIQQLEQDTGSILLIRNSKELVLTKEG 72
           +L+ + LF+ +V  G F+  AK+  M  +T+SR++ +LE    + L++R++++L LT+EG
Sbjct: 8   ELELIHLFVHLVNTGGFSQVAKELGMPVATVSRKVTKLESLLDTQLIMRSTRKLRLTEEG 67

Query: 73  EQLFHSYAELFAQIERKQE-EVEQAKRDYRGEIAISAPVLPLRHQLTPLALEFAELHPNV 131
            +LF  Y  + AQ +R  E  VE+A+    G + I+APV  +      +  +F++ +P++
Sbjct: 68  SELFGRYQNVVAQFDRCSEPRVEKAE----GTLRIAAPVSIISMIFIGVLNDFSKAYPDI 123

Query: 132 TLRM-QVGSGLDYFSQRDLDIALRFGPQPESDWVARKLARNPSVLCASAELAAKLSTVTL 190
            L + Q  S +D   +  +D+A+  G QP+S WV++ L      L AS    A   T   
Sbjct: 124 QLHITQNNSSIDLIDE-GVDVAIVGGAQPDSSWVSKSLGVLDYGLFASPGYLACAGTP-- 180

Query: 191 TLAHPEQLKEHPLLSLNHKLPWIFHHHSVAQKVQFIPTARLCSDELDTIVQATLQGMGIA 250
              HP+QL EH L+ +     W   H S  +   +   A+L   +L+  V+AT+   GI 
Sbjct: 181 --QHPDQLVEHSLIKVWPLFNWSMKHVS-GEDFYYEGPAKLTLGDLNGAVRATVDDGGIL 237

Query: 251 RLPRGLMEPLLRSGQLIELLPEWEIEGADVYLLHPQRRFLPERTQALIDYI 301
             P   ++  L SG+L  +LP+W  E   + LL+ QR   P + +  I+++
Sbjct: 238 YGPELFVKGELASGELRRVLPDWHGEQRRISLLYHQRTHQPLKVKLFIEFM 288