Pairwise Alignments

Query, 316 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  131 bits (329), Expect = 2e-35
 Identities = 85/292 (29%), Positives = 150/292 (51%), Gaps = 15/292 (5%)

Query: 16  DLALFLTVVRCGSFALAAKQKSMSTSTLSRRIQQLEQDTGSILLIRNSKELVLTKEGEQL 75
           ++ LF++VV  GSF+ AA++  ++ S +S+RI  LEQ  G  L+ R ++ L LT  G Q 
Sbjct: 6   NIPLFVSVVELGSFSEAARRLGINKSAVSKRISALEQALGVKLIQRTTRRLHLTDAGRQY 65

Query: 76  FHSYAELFAQIERKQEEVEQAKRDYRGEIAISAPVLPLRHQLTPLALEFAELHPNVTLRM 135
           +    +  A +++ Q+ +   +   +G + +S P +  +  + PL  EF+  +P + L +
Sbjct: 66  YEYVHQAAALMQQAQDALASQQGAVQGSLKVSLPNVFGQRHIAPLLSEFSRQYPTINLEV 125

Query: 136 QVGSGLDYFSQRDLDIALRFGPQPESDWVARKLARNPSVLCASAELAAKLSTVTLTLAHP 195
            +   +    +  LD+ +R G  P+S  VA KLA   S+LCAS +  A  S       HP
Sbjct: 126 SLDDRVVDLLKEGLDMVVRIGDLPDSSLVAVKLAPCHSLLCASPDYLAHQS-------HP 178

Query: 196 EQLKE---HPLLSLNH---KLPWIFHHHSVAQKVQFIPTARLCSDELDTIVQATLQGMGI 249
             L +   H  L  ++    L W F       +++  P   +  +  + I +  L GMGI
Sbjct: 179 RSLADLRGHNCLFYSYFRGGLEWSFERRGEVSRIK--PRGNIKVNNSEVIRRLLLDGMGI 236

Query: 250 ARLPRGLMEPLLRSGQLIELLPEWEIEGADVYLLHPQRRFLPERTQALIDYI 301
           A +PR L+E  L +G L+ +L +++     +Y L P+R+ +P R +  ID++
Sbjct: 237 ALMPRYLVEEELAAGTLVPVLSDYQAPTHGIYALTPERQHMPARLRVFIDFL 288