Pairwise Alignments

Query, 316 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 301 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  131 bits (330), Expect = 2e-35
 Identities = 79/295 (26%), Positives = 151/295 (51%), Gaps = 6/295 (2%)

Query: 13  KLDDLALFLTVVRCGSFALAAKQKSMSTSTLSRRIQQLEQDTGSILLIRNSKELVLTKEG 72
           K+  +  F+ V  CGSF  AA+Q  +S   +SR IQ++E+  G  LL R ++ + L+ +G
Sbjct: 3   KISAIRSFVEVASCGSFTQAAEQLGLSRLQVSRHIQEVERWLGLRLLHRTTRSVSLSVQG 62

Query: 73  EQLFHSYAELFAQIERKQEEVEQAKRDYRGEIAISAPVLPLRHQLTPLALEFAELHPNVT 132
           E+ F    ++  ++   Q   ++ +++  G I I++P+   +  L     +F   HP V 
Sbjct: 63  EEAFIYCQKILDEVAALQNRAQRHRQELVGSIRIASPIGLGQALLFDAVDDFTREHPEVK 122

Query: 133 LRMQVGSGLDYFSQRDLDIALRFGPQPESDWVARKLARNPSVLCASAELAAKLSTVTLTL 192
           +++Q+   +       +DIALR+  QP+   +AR+L    SVLCAS +  A    +T   
Sbjct: 123 VQLQLSDEMVQLVDERVDIALRYTQQPDESLIARRLMHIDSVLCASPDYLAGHEPITSL- 181

Query: 193 AHPEQLKEHPLLSLNHKLPWIFHHHSVAQKVQFIPTARLCSDELDTIVQATLQGMGIARL 252
              + +  H  L    +  W+F   +  Q ++   +  L ++++  +++A ++G G+  L
Sbjct: 182 ---DDITAHNCLLHASQTRWLFVKDN--QNIEKKISGNLQANDMGVLIKAAMRGKGLIHL 236

Query: 253 PRGLMEPLLRSGQLIELLPEWEIEGADVYLLHPQRRFLPERTQALIDYIMTHWSR 307
           P  L    L SG+L+ELLPE+ + G  ++ ++  R +     +  ID++   W +
Sbjct: 237 PCDLANAHLASGELVELLPEYHLPGKTLWAVYLSRSYQQHLIRHFIDFLAERWQQ 291