Pairwise Alignments

Query, 316 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 303 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  118 bits (295), Expect = 2e-31
 Identities = 89/296 (30%), Positives = 137/296 (46%), Gaps = 9/296 (3%)

Query: 14  LDDLALFLTVVRCGSFALAAKQKSMSTSTLSRRIQQLEQDTGSILLIRNSKELVLTKEGE 73
           L+ + LF  VVR   F+ AA++     ST+SR+I QLE++ G  LL R+++ L LT+ G 
Sbjct: 4   LNGMMLFAAVVRAKGFSQAARETGHPKSTISRKIAQLEEELGVRLLQRDTRNLSLTQVGA 63

Query: 74  QLFHSYAELFAQIERKQEEVEQAKRDYRGEIAISAPVLPLRHQLTPLALEFAELHPNVTL 133
             +     +  ++E  +  +E    D  G + I+ PV   +  +  L   F  L+PNV L
Sbjct: 64  LFYQHCDSIRNEVEAAKAVIESTHDDVSGSLRIAIPVSFSQELIANLCSGFMRLYPNVEL 123

Query: 134 RMQVGSGLDYFSQRDLDIALRFGPQPESDWVARKLARNPSVLCASAELAAKLSTVTLTLA 193
            +Q             DIA+++GP   SD VAR L     +L AS        T     A
Sbjct: 124 DVQFTDNDIGLVGEGYDIAIKYGPLQSSDLVARLLFERQPILVASPGYLKTRGTP----A 179

Query: 194 HPEQLKEHP--LLSLNHKLP-WIFHHHSVAQKVQFIPTARLCSDELDTIVQATLQGMGIA 250
            P++L +H   LL  +   P W     +    V F    R+ S  +  + Q  L   GIA
Sbjct: 180 TPKELSDHSGILLGTSRSAPIWPLGKGTRKTMVSFQRKVRVNSPIM--VKQLALDDFGIA 237

Query: 251 RLPRGLMEPLLRSGQLIELLPEWEIEGADVYLLHPQRRFLPERTQALIDYIMTHWS 306
            L     +  L +GQL+ +L EW +E   VY ++  RR L     A +D+ +  +S
Sbjct: 238 MLSNSACKTELANGQLVPILQEWPMEPFKVYGVYSSRRQLATNISAFLDFFVKRFS 293