Pairwise Alignments

Query, 316 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 320 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score =  132 bits (331), Expect = 1e-35
 Identities = 85/303 (28%), Positives = 151/303 (49%), Gaps = 21/303 (6%)

Query: 17  LALFLTVVRCGSFALAAKQKSMSTSTLSRRIQQLEQDTGSILLIRNSKELVLTKEGEQLF 76
           + +F  +   GS + AA Q ++S+S +S+++ +LE D G  L  RN++ L LT+ G   +
Sbjct: 9   MIVFAAIAEKGSMSAAATQLNLSSSAVSQQVAKLEMDMGISLFHRNTRHLTLTEAGALFY 68

Query: 77  HSYAELFAQIERKQEEVEQAKRDYRGEIAISAPV--------LPLRHQLTPLALEFAELH 128
            +  ++   +E  ++++   K    G++ I+APV         PL H L          H
Sbjct: 69  ENCIKIIKIVESAEQQLHALKGTPSGKLKIAAPVGFGGGLLSQPLAHLLAA--------H 120

Query: 129 PNVTLRMQVGSGLDYFSQRDLDIALRFGPQPESDWVARKLARNPSVLCASAELAAKLSTV 188
           P ++L +Q+  G        +D+A+  GP  +S+ +AR LA    +LCA    A     +
Sbjct: 121 PQISLNLQLQDGPIDIVNEGIDLAICIGPLSDSNLIARPLADWRMLLCA----APSYIPL 176

Query: 189 TLTLAHPEQLKEHPLLSLNHKLPWIFHHHSVAQKVQFIPTARLCSDELDTIVQATLQGMG 248
             +L HP  L+    +S ++  P    H    ++++ +P  R+  + + T++Q TL G+G
Sbjct: 177 HQSLQHPADLQGFNRISHSYAKPEFLTHLQTQERIE-LPAQRINVNNMQTLIQLTLDGLG 235

Query: 249 IARLPRGLMEPLLRSGQLIELLPEWEIEGADVYLLHPQRRFLPERTQALIDYIMTHWSRV 308
            A LP   +   L SGQL+ LLPEW +    VY +   R   P + +  I  +  ++S++
Sbjct: 236 FAVLPEPEVHQYLASGQLVTLLPEWSLRTYSVYSVTSARDKQPAKVKEAIAALSQYFSQM 295

Query: 309 AFS 311
            FS
Sbjct: 296 DFS 298