Pairwise Alignments

Query, 316 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 298 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score =  154 bits (388), Expect = 3e-42
 Identities = 98/290 (33%), Positives = 157/290 (54%), Gaps = 11/290 (3%)

Query: 17  LALFLTVVRCGSFALAAKQKSMSTSTLSRRIQQLEQDTGSILLIRNSKELVLTKEGEQLF 76
           L +F+TVV CGSF+ A ++  +S S +S+RI QLEQ  G  LL R ++ L LT  G + F
Sbjct: 7   LPIFVTVVECGSFSAAGQKLGLSKSAISKRITQLEQHLGIQLLQRTTRSLSLTDAGARYF 66

Query: 77  HSYAELFAQIERKQEEVEQAKRDYRGEIAISAPVLPLRHQLTPLALEFAELHPNVTLRMQ 136
                     +   + + + ++  +G + IS P++  R  + PL  EF + +P++ L+MQ
Sbjct: 67  EYIRPAVQLTQEGLDAISELQQTPKGNLRISVPMVFGRLYIAPLIAEFLKRYPDIQLQMQ 126

Query: 137 VGSGLDYFSQRDLDIALRFGPQPESDWVARKLARNPSVLCAS-AELAAKLSTVTLTLAHP 195
           +            D+A+R G  P+S  +ARK+A   SV+CAS A LA   S +T     P
Sbjct: 127 MDDKTTDLIAGGFDLAIRIGELPDSSLIARKIAPCLSVICASPAYLAQHGSPMT-----P 181

Query: 196 EQLKEHPLLSLNH---KLPWIFHHHSVAQKVQFIPTARLCSDELDTIVQATLQGMGIARL 252
             L +H  L  ++    + W FH     Q+VQ  P      +  D I QA L G+GIA L
Sbjct: 182 SGLTQHNCLFYSYFQDGVEWSFHSPYGVQRVQ--PKGNYQVNNSDAIHQACLDGLGIANL 239

Query: 253 PRGLMEPLLRSGQLIELLPEWEIEGADVYLLHPQRRFLPERTQALIDYIM 302
           PR ++E  L++G+L  +L ++ +    +Y ++PQR++LP +   LI ++M
Sbjct: 240 PRFIVESDLQAGRLQTILTDFPLPEHGIYAVYPQRKYLPTKVTVLIGFLM 289