Pairwise Alignments

Query, 316 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 300 a.a., transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score =  140 bits (352), Expect = 5e-38
 Identities = 85/295 (28%), Positives = 144/295 (48%), Gaps = 6/295 (2%)

Query: 13  KLDDLALFLTVVRCGSFALAAKQKSMSTSTLSRRIQQLEQDTGSILLIRNSKELVLTKEG 72
           K+  +  F+ V  CGSF  AA+   +S   +SR IQ++EQ     LL R ++ + LT +G
Sbjct: 3   KIAAMRSFIEVANCGSFTKAAEHLDLSRLQVSRHIQEIEQWLSLRLLHRTTRSVSLTLQG 62

Query: 73  EQLFHSYAELFAQIERKQEEVEQAKRDYRGEIAISAPVLPLRHQLTPLALEFAELHPNVT 132
           E+       + +++   +        +  G I I+ PV   +H L  +   F +LHP V 
Sbjct: 63  EEALQYCQRVLSEVAAMESRAHSHNTELVGSIRIATPVGLGQHSLFDVVDRFIKLHPKVN 122

Query: 133 LRMQVGSGLDYFSQRDLDIALRFGPQPESDWVARKLARNPSVLCASAELAAKLSTVTLTL 192
           +++ +           +D+ALR+  QP+ + +ARKL    +VLCA+    A+   +T+  
Sbjct: 123 IQLLMSDSFAQLVDERVDVALRYTEQPDENLIARKLMSIDAVLCAAPSYLAQAEPLTV-- 180

Query: 193 AHPEQLKEHPLLSLNHKLPWIFHHHSVAQKVQFIPTARLCSDELDTIVQATLQGMGIARL 252
             P  L  H  L  + +  W       ++ ++  P   L ++E+  +V A L+G GIA L
Sbjct: 181 --PNDLLSHNCLIHSSQQHWQLLKEQQSELIK--PMGNLMANEMGVLVSAALRGHGIAYL 236

Query: 253 PRGLMEPLLRSGQLIELLPEWEIEGADVYLLHPQRRFLPERTQALIDYIMTHWSR 307
           P  L  P L SGQL E+LPE+   G  ++ ++  R +     +A ID+    W +
Sbjct: 237 PCDLANPYLASGQLQEVLPEYTAPGQTLWAVYLSRSYQQALVRAFIDFTAQQWQQ 291