Pairwise Alignments

Query, 316 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 303 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score =  122 bits (305), Expect = 1e-32
 Identities = 92/297 (30%), Positives = 142/297 (47%), Gaps = 11/297 (3%)

Query: 14  LDDLALFLTVVRCGSFALAAKQKSMSTSTLSRRIQQLEQDTGSILLIRNSKELVLTKEGE 73
           L+ + LF  VVR   F+ AA++     ST+SR+I QLE++ G  LL R+++ L LT+ G 
Sbjct: 4   LNGMMLFAAVVRAKGFSQAARETGHPKSTISRKIAQLEEELGVRLLQRDTRNLSLTQVGA 63

Query: 74  QLFHSYAELFAQIERKQEEVEQAKRDYRGEIAISAPVLPLRHQLTPLALEFAELHPNVTL 133
             +     +  ++E  +  +E    D  G + I+ PV   +  +  L   F  L+PNV L
Sbjct: 64  LFYQHCDSIRNEVEAAKAVIESTHDDVSGSLRIAIPVSFSQELIANLCSGFMRLYPNVEL 123

Query: 134 RMQVGSGLDYFSQRDLDIALRFGPQPESDWVARKL-ARNPSVLCASAELAAKLSTVTLTL 192
            +Q             DIA+++GP   SD VAR L  R P ++ + A L A+ +  T   
Sbjct: 124 DVQFTDNDIGLVGEGYDIAIKYGPLQSSDLVARLLFERQPILVASPAYLKARGTPAT--- 180

Query: 193 AHPEQLKEHP--LLSLNHKLP-WIFHHHSVAQKVQFIPTARLCSDELDTIVQATLQGMGI 249
             P++L EH   LL  +   P W     +    V F    R+ S  +  + Q  L   GI
Sbjct: 181 --PKELSEHSGILLGTSRSAPIWPLGKGARKTMVNFQRKVRVNSPIM--VKQLALDDFGI 236

Query: 250 ARLPRGLMEPLLRSGQLIELLPEWEIEGADVYLLHPQRRFLPERTQALIDYIMTHWS 306
           A L     +  L +GQL+ +L EW IE   VY ++  RR L     A +D+ +  +S
Sbjct: 237 AMLSNSACKTELANGQLVPILQEWPIEPFKVYGVYSSRRQLATNISAFLDFFVKRFS 293