Pairwise Alignments

Query, 316 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 295 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score =  151 bits (382), Expect = 2e-41
 Identities = 92/295 (31%), Positives = 150/295 (50%), Gaps = 8/295 (2%)

Query: 14  LDDLALFLTVVRCGSFALAAKQKSMSTSTLSRRIQQLEQDTGSILLIRNSKELVLTKEGE 73
           LDDL  F  V R GSF  AA+   M  STLSRRI+QLE D    LL R++  ++LT  GE
Sbjct: 7   LDDLRCFCAVARSGSFKEAAQSLGMPLSTLSRRIRQLETDLQLRLLNRDAHRVILTSIGE 66

Query: 74  QLFHSYAELFAQIERKQEEVEQAKRDYRGEIAISAPVLPLRHQLTPLALEFAELHPNVTL 133
           Q F     LF ++    E++ + K   +G+I ISAP+    H L  +  +F   +P++ L
Sbjct: 67  QYFERSVALFDELNNIDEDLHRDKYQPQGKIRISAPINSGTHFLRSIFYDFLLQYPDIQL 126

Query: 134 RMQVGSGLDYFSQRDLDIALRFGPQPESDWVARKLARNPSVLCASAELAAKLSTVTLTLA 193
            +   + L       +D+A R G     +W+AR L     +LC+  +    +S++T    
Sbjct: 127 DLSFSNSLIDIEAEGMDVAFRVGNPVVENWIARPLKHIHFILCSHPDY--DISSITT--- 181

Query: 194 HPEQLKEHPLLSLNHKLPWIFHHHSVAQKVQFIPT--ARLCSDELDTIVQATLQGMGIAR 251
            P++L  HP +  +  +PW   H +  ++  + P    RL  DEL  +  A   G+GI  
Sbjct: 182 -PDKLCGHPTIICHPMIPWQLVHKTTGEEFDYHPNKGVRLEVDELMLLTHAIKTGIGIGY 240

Query: 252 LPRGLMEPLLRSGQLIELLPEWEIEGADVYLLHPQRRFLPERTQALIDYIMTHWS 306
           +P     P++  G++  +LPEW  +   + +L+  R  LP R +  I+++  H++
Sbjct: 241 VPDYFALPMIAQGEVNHVLPEWSSKARTLSMLYRDRDHLPMRVRLFIEFVKLHFN 295