Pairwise Alignments

Query, 450 a.a., molecular chaperone from Vibrio cholerae E7946 ATCC 55056

Subject, 620 a.a., chaperone protein HscA (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 57.4 bits (137), Expect = 1e-12
 Identities = 107/453 (23%), Positives = 184/453 (40%), Gaps = 102/453 (22%)

Query: 3   IGFDYGTANCSVASMQDGRPVLIPLEGDSLYIPSTLAAPTRESVSEHLFRHRHIAPADAL 62
           +G D GT N  VA+++ G    +P E     +PS +   T+E +        ++A   + 
Sbjct: 22  VGIDLGTTNSLVAAVRSGVTATLPDENGQHSLPS-IVRYTQEGIEVG-----YVAAMSSA 75

Query: 63  GEQLLRRSVASNREEGIDLQFADVVFGQAALDLYLSDPHEVYYVKSPKS----FLGAMGL 118
            +   + ++ S +             G++  D+   +    Y  ++ ++    F+   GL
Sbjct: 76  QDP--KNTIVSVKR----------FMGRSLTDIQSGEQSFPYQFEASENGLPLFVTPQGL 123

Query: 119 -HDIQLSFFEDLVCAMMANIKAQAEAHSDAVIQDAVIGRPVNFHGRGGEDSNQQAENILR 177
            + +Q+S        ++  +  +AE      +Q AVI  P  F     +D+ +Q     +
Sbjct: 124 VNPVQVS------AEILRPLIERAEKTLGGELQGAVITVPAYF-----DDAQRQGT---K 169

Query: 178 RAATRAGFRHLEFQFEPVAAGLEYEATLTEDKTVLVVDIGGGTTDCSLIQMGPSWRGKAD 237
            AA+  G + L    EP AA + Y     ++  + + D+GGGT D S++++    RG   
Sbjct: 170 DAASLLGVKVLRLLNEPTAAAIAYGLDSKQEGVIAIYDLGGGTFDISILRLN---RGV-- 224

Query: 238 RTQSLIAHTGQRVGGNDLDIHLAFKALMTPFGFGTQTQSGLDMPITQFWNPIAINDVSAQ 297
             + L       +GG+D D HL                  L   + Q W    + D+ +Q
Sbjct: 225 -FEVLATGGDSALGGDDFD-HL------------------LQAHMLQVWQ---LTDIDSQ 261

Query: 298 AKFFSRENLADLKRLHKEAREPEKLARLLAVYHDTLGYSLVKKAEEAKIALSDTARAIAQ 357
               SR+ L + +R+ KEA         L    DT          EA + L+D +     
Sbjct: 262 ---LSRQLLIEARRV-KEA---------LTYASDT----------EASLTLADGS----- 293

Query: 358 IKVLSELLEVEIQREAMIEAIDVPKTKMIELVTEAVTLGGVTPDVIF---MTGGSARSPI 414
             VL +++  + Q E +I A+ V KT  I      +   GVT D +    M GGS R P+
Sbjct: 294 --VLKQVV-TKAQFEGLIAAL-VKKT--IASCRRTLRDAGVTADEVLETVMVGGSTRVPL 347

Query: 415 LRAGVEQALPNVPIVSGNYFGSVTAGLARWAQV 447
           +R  VE      P+ S +    V  G A  A +
Sbjct: 348 VREQVEAFFGKAPLTSIDPDRVVAIGAAIQADI 380