Pairwise Alignments

Query, 450 a.a., molecular chaperone from Vibrio cholerae E7946 ATCC 55056

Subject, 792 a.a., chaperone protein dnaK (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 44.3 bits (103), Expect = 1e-08
 Identities = 61/261 (23%), Positives = 112/261 (42%), Gaps = 56/261 (21%)

Query: 193 EPVAAGLEY--EATLTEDKTV---------LVVDIGGGTTDCSLIQMGPSWRGKADRTQS 241
           EP AA L Y  E+ +  +  V         LV D G GT D S++++G  ++G   +  S
Sbjct: 198 EPNAAFLNYIHESEMNNEAVVIPKDINPKMLVFDFGAGTCDISILEIGVDYKGVYSKNLS 257

Query: 242 LIAHTGQRVGGNDLDIHLAFKALMTPFGFGTQTQSGLDMPI------TQFWNPIAINDVS 295
           +     +++GGND+D ++A++ L         + + LDM I       +  N +     +
Sbjct: 258 ISKF--EKLGGNDIDRYIAYEILYPEL----LSHNHLDMDIFIMSEKKKIINALLTTAEN 311

Query: 296 AQAKFFSRENLA----DLKRLHKEAREPEKLARLL----AVYHDTLGYSLVKKAEEAKI- 346
            + +     +L     DL  L +E +   K  R+      +Y D +  + ++ AE  K+ 
Sbjct: 312 LKIRICKAISLMRDSFDLSGLEQEYKVSVKDIRINTSKGVLYMDEIFLTSIQFAELMKVF 371

Query: 347 --ALSDTARAIAQI-KVLSELLEVEIQREAMIEAIDVPKTKMIELVTEAVTLGGVTPDVI 403
               SD  +   QI   + + ++  I R+A +E  DV                    D +
Sbjct: 372 TRKKSDVIQKEKQIYNSIYDCVKTSI-RKARLEVDDV--------------------DYV 410

Query: 404 FMTGGSARSPILRAGVEQALP 424
            + GGS+ +P ++A ++  LP
Sbjct: 411 LLVGGSSLNPYVQAALKSWLP 431