Pairwise Alignments

Query, 450 a.a., molecular chaperone from Vibrio cholerae E7946 ATCC 55056

Subject, 639 a.a., molecular chaperone DnaK (RefSeq) from Shewanella sp. ANA-3

 Score = 48.9 bits (115), Expect = 5e-10
 Identities = 92/379 (24%), Positives = 160/379 (42%), Gaps = 73/379 (19%)

Query: 3   IGFDYGTANCSVASMQDGRP-VLIPLEGDSLYIPSTLAAPTRESVSEHLFRHRHIAPADA 61
           IG D GT N  VA +  G+  VL   EGD    PS +A    E++               
Sbjct: 5   IGIDLGTTNSCVAVLDGGKARVLENAEGDRT-TPSIIAYTDDETI--------------- 48

Query: 62  LGEQLLRRSVASNR------EEGIDLQFADVVFGQAALDLYLSDPHEVYYVKSPKSFLGA 115
           +G+   R++V +        +  I  +F D    +   D+ +  P ++    +  +++ +
Sbjct: 49  VGQPAKRQAVTNPNNTFFAIKRLIGRRFKD---DEVQRDVNIM-PFKIIAADNGDAWVES 104

Query: 116 MG--LHDIQLSFFEDLVCAMMANIKAQAEAHSDAVIQDAVIGRPVNFHGRGGEDSNQQAE 173
            G  +   Q+S        ++  +K  AE      + +AVI  P  F+     DS +QA 
Sbjct: 105 RGNKMAPPQVS------AEILKKMKKTAEDFLGEEVTEAVITVPAYFN-----DSQRQAT 153

Query: 174 NILRRAATRAGFRHLEFQFEPVAAGLEYEATLTE-DKTVLVVDIGGGTTDCSLIQMGPSW 232
              + A   AG        EP AA L Y     + D  V V D+GGGT D S+I++  + 
Sbjct: 154 ---KDAGRIAGLEVKRIINEPTAAALAYGIDKKQGDNIVAVYDLGGGTFDISIIEIDSN- 209

Query: 233 RGKADRTQSLIAHTGQ-RVGGNDLDIHLAFKALMTPFGFGTQTQSGLDMPITQFWNPIA- 290
               D+T  ++A  G   +GG D D  L    L   F    + + GLD+      +P+A 
Sbjct: 210 --DGDQTFEVLATNGDTHLGGEDFDNRL-INYLADEF----KKEQGLDLR----KDPLAM 258

Query: 291 --INDVSAQAKF---FSRENLADLKRLHKEAREPEKL------ARLLAVYHDTLGYSLVK 339
             + + + +AK     + +   +L  +  +A  P+ L      A+L ++  D     +++
Sbjct: 259 QRLKEAAEKAKIELSSTNQTEVNLPYITADATGPKHLVVKITRAKLESLVEDL----IIR 314

Query: 340 KAEEAKIALSDTARAIAQI 358
             E  K+AL+D   +++ I
Sbjct: 315 TLEPLKVALADADLSVSDI 333