Pairwise Alignments

Query, 1309 a.a., ATP-dependent RNA helicase HrpA from Vibrio cholerae E7946 ATCC 55056

Subject, 154 a.a., HrpA-like helicases from Pseudomonas stutzeri RCH2

 Score = 78.6 bits (192), Expect = 3e-19
 Identities = 45/128 (35%), Positives = 71/128 (55%), Gaps = 8/128 (6%)

Query: 87  LPVSQKRDDIAQAIAHHQVVIVAGETGSGKTTQLPKICAELGRGKYGLIGHT----QPRR 142
           LP+ +    + QA+      ++    G+GKTT++P   A LG    G  G T    +PRR
Sbjct: 4   LPIDEALPALRQALQQRDEAVLEAPPGAGKTTRVP--LALLGEAWLG--GQTIIMLEPRR 59

Query: 143 LAARSVANRIAEEMETELGGFVGYKVRFTDQISDQTQIKLMTDGILLAEIQNDRFLNQYD 202
           LAAR+ A R+A E+   +G  VGY++R   ++   T+I+++T+GIL   +Q+D  L    
Sbjct: 60  LAARAAAERLASELGERVGETVGYRIRLDSKVGPNTRIEVVTEGILARRLQDDPALEGVG 119

Query: 203 TIIIDEAH 210
            +I DE H
Sbjct: 120 MVIFDEFH 127