Pairwise Alignments

Query, 537 a.a., sensor domain-containing diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 523 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Pseudomonas fluorescens FW300-N2E2

 Score = 99.0 bits (245), Expect = 4e-25
 Identities = 70/222 (31%), Positives = 116/222 (52%), Gaps = 18/222 (8%)

Query: 312 SEEWVLLG---------LGLGGVIISL-LLSYIMRMQLEEKQRLTDMIEERTAELRYLVE 361
           SEE +L G         L +G V++ + L  ++   Q+   +R+   + +    L  +  
Sbjct: 287 SEEAILSGWHDRAFQSSLIVGLVVLGICLFGWVFVRQVRNSERIEADLRKAQEALELIAT 346

Query: 362 HDSLTNIYNRRFFSQHLC----KMLDEKQSFTLISFDIDRFKQINDSYGHLAGDYALTHV 417
           HDSLT + NRR F + L     +   ++   +LI  DID FK+ ND+YGH+AGD+ L  V
Sbjct: 347 HDSLTGLANRRLFERALDVEFGRGARQRSPLSLIMLDIDFFKRYNDAYGHVAGDHCLAEV 406

Query: 418 VDVVKKEL-VESDIFARFGGDEFAILSSVTDETALYTYLERIRKVVEAEPVMLNAETPLT 476
             V+K     ++D+  R+GG+EFA+L   T+ +      E+IR+ V  + ++ +      
Sbjct: 407 AKVLKDCCHRKADLAVRYGGEEFAVLLPDTNLSGAMALAEQIRRSVIDKHIIHSGSPTGY 466

Query: 477 LTISIG--ASINCEYSEPEI-LQSVDDQLYLSKSKGRNRVSI 515
           LT+S+G  A +       E+ +Q  D  LY +K  GRNRV++
Sbjct: 467 LTVSLGCYAFVPSSLDSIEVFIQRADAALYQAKYNGRNRVAV 508