Pairwise Alignments

Query, 537 a.a., sensor domain-containing diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 317 a.a., diguanylate cyclase (GGDEF domain) with PAS/PAC sensor from Pseudomonas fluorescens FW300-N2E2

 Score =  110 bits (276), Expect = 6e-29
 Identities = 74/237 (31%), Positives = 122/237 (51%), Gaps = 20/237 (8%)

Query: 293 VLPNRDWVLEFELHQPINHSEEWV-----LLGLGLGGVIISLLLSYIMRMQLEEKQRLTD 347
           V   R +++ F+ +QPI   E ++     LL L      I  +   I  +      R   
Sbjct: 85  VWEQRPYLIRFKSYQPITGQEAFMYQNTTLLPLRSPDNTIKHICLVIYDVTDVATNR--H 142

Query: 348 MIEERTAELRYLVEHDSLTNIYNRRFFSQHLCKMLDEKQSF----TLISFDIDRFKQIND 403
            ++   A+L+ L   D LT +YNR  +   L       Q +    +L+  DID FK++ND
Sbjct: 143 QLQAANAQLQLLSSTDRLTGLYNRGHWESDLKAAYARHQRYGHALSLVMLDIDHFKRVND 202

Query: 404 SYGHLAGDYALTHVVDVVKKELVESDIFARFGGDEFAILSSVTDETALYTYLERIRKVVE 463
           +YGH AGD  +  V  ++++   +SD+  R+GG+EF ++ S TD +  + + ER+R  VE
Sbjct: 203 TYGHQAGDKVIEQVARLLREHARDSDVVGRYGGEEFGVVLSDTDSSGAHAFAERMRHSVE 262

Query: 464 AEPVMLNAETPLTLTISIGASINCEYSEP-----EILQSVDDQLYLSKSKGRNRVSI 515
           A  V+ N +T +  TIS+G +   + S+P     +++   D  LY SK  GRNRV++
Sbjct: 263 ALEVLYNDQT-IRFTISLGVA---DLSQPSNDHADLIARADQALYTSKKTGRNRVTV 315