Pairwise Alignments

Query, 537 a.a., sensor domain-containing diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 308 a.a., GGDEF domain protein from Pseudomonas fluorescens FW300-N1B4

 Score = 94.7 bits (234), Expect = 4e-24
 Identities = 61/159 (38%), Positives = 87/159 (54%), Gaps = 6/159 (3%)

Query: 363 DSLTNIYNRRFFSQHLCKMLD----EKQSFTLISFDIDRFKQINDSYGHLAGDYALTHVV 418
           D LT+  NR    Q L + ++      Q  +L+  DID FKQIND+YGH AGD  L  V 
Sbjct: 150 DPLTDTGNRIAMDQTLEREIEMSRRHSQPLSLLMLDIDHFKQINDTYGHSAGDEVLKAVA 209

Query: 419 DVVKKELVESDIFARFGGDEFAILSSVTDETALYTYLERIRKVVEAEPVMLNAETPLTLT 478
             +K +L   D+  RFGG+EF IL S T+  A     ER+R   +A+      +  + LT
Sbjct: 210 ASIKNQLRNVDMVFRFGGEEFLILLSNTNREAAAMIGERLRFAAQAQDYEAEGKM-IELT 268

Query: 479 ISIGASINCEYSEPE-ILQSVDDQLYLSKSKGRNRVSIA 516
           +SIG S        E +L+  D  LY++K +GRNR+++A
Sbjct: 269 VSIGCSTLLPGESAESLLRRADSALYVAKREGRNRLAMA 307