Pairwise Alignments

Query, 537 a.a., sensor domain-containing diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 729 a.a., GGDEF domain-containing protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  111 bits (277), Expect = 1e-28
 Identities = 71/196 (36%), Positives = 119/196 (60%), Gaps = 16/196 (8%)

Query: 330 LLSYIMRMQLEEKQRL-TDMIEERTAELRYLVEHDSLTNIYNRRFFS------QHLCKML 382
           LLSY  +++LEEK    T  +E+   +L+ L E D LT +YNRR+ +      Q +C+  
Sbjct: 519 LLSY--QLELEEKVAFRTFELEKANQKLQALAERDPLTGLYNRRYTTAGFAPLQAMCERS 576

Query: 383 DEKQSFTLISFDIDRFKQINDSYGHLAGDYALTHVVDVVKKELV-ESDIFARFGGDEFAI 441
            E  +  ++  D+D FK IND++GHLAGD  L  V  ++ +    +SD+ AR+GG+EF +
Sbjct: 577 GE--AIAVVILDLDFFKAINDNHGHLAGDECLRQVAILLTQHFKRDSDLVARYGGEEFLL 634

Query: 442 LSSVTDETALYTYLERIRKVVEAEPVML-NAETPLTLTISIGASI-NCEYSE--PEILQS 497
           +  +T+   +  +L  +R+ +   PV+L  A+ P+ L++S+GA++ N  +S+     L+ 
Sbjct: 635 ILPMTNALKIEHHLNLLREQLARHPVVLPGAQEPIHLSVSVGAAVANASFSDTLEAWLKV 694

Query: 498 VDDQLYLSKSKGRNRV 513
            DD LY +K++GRNRV
Sbjct: 695 ADDNLYQAKAEGRNRV 710