Pairwise Alignments

Query, 537 a.a., sensor domain-containing diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 625 a.a., GGDEF domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  103 bits (256), Expect = 2e-26
 Identities = 69/203 (33%), Positives = 102/203 (50%), Gaps = 23/203 (11%)

Query: 335 MRMQLEEKQRLTDMIEERTAELRYLVEH--------------DSLTNIYNRRFFSQHLC- 379
           ++++ E  +RL   ++ERT EL   +                DSLT + NR  F + L  
Sbjct: 415 LKVEAETNERLEQKVQERTLELEITLRELHEVNQKLTEQSTIDSLTGVKNRSAFDKRLLA 474

Query: 380 -KMLDEKQS--FTLISFDIDRFKQINDSYGHLAGDYALTHVVDVVKKELVE-SDIFARFG 435
              +  +Q     L+  DIDRFK IND +GHLAGD AL  +   +++ L   +D+ +RFG
Sbjct: 475 ESRISRRQETPIALLMLDIDRFKSINDQFGHLAGDQALKLIAQTLQQHLKRPTDLVSRFG 534

Query: 436 GDEFAILSSVTDETALYTYLERIRKVVEAEPVMLNAETPLTLTISIGAS---INCEYSEP 492
           G+EFAI+   T         E IR  V    +    + P+ LT+SIG S   I  E    
Sbjct: 535 GEEFAIILPNTTADGALQVAESIRDTVSCIGLTWEGK-PIPLTVSIGVSADVIMNEQHST 593

Query: 493 EILQSVDDQLYLSKSKGRNRVSI 515
           E+L+  D  LY +K+ GRN+V +
Sbjct: 594 ELLEQADKALYQAKNSGRNQVKL 616