Pairwise Alignments

Query, 537 a.a., sensor domain-containing diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 461 a.a., extracellular solute-binding protein, family 3/GGDEF domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  115 bits (288), Expect = 4e-30
 Identities = 70/198 (35%), Positives = 106/198 (53%), Gaps = 1/198 (0%)

Query: 322 LGGVIISLLLSYIMRMQLEEKQRLTDMIEERTAELRYLVEHDSLTNIYNRRFFSQHLCKM 381
           L   I+S  L Y ++++   + R T  +E+   +L  L + DSLT I+NR +F   L   
Sbjct: 265 LAAGILSAGLFYTLQLRRTVRIR-TRQLEDANHKLTLLAQTDSLTGIHNRHYFFNQLSDT 323

Query: 382 LDEKQSFTLISFDIDRFKQINDSYGHLAGDYALTHVVDVVKKELVESDIFARFGGDEFAI 441
            D   S TLI FDID FK IND+YGH AGD A+  +   V++ L     FAR GG+EFAI
Sbjct: 324 QDLASSLTLIVFDIDDFKSINDTYGHSAGDNAICLITTCVREVLEPEMQFARIGGEEFAI 383

Query: 442 LSSVTDETALYTYLERIRKVVEAEPVMLNAETPLTLTISIGASINCEYSEPEILQSVDDQ 501
           L+      A     +RI + +  + + L + T ++LT+S+G +       P  L + D  
Sbjct: 384 LARDKSAQASQQLAKRICQQIAQKKLPLASNTLISLTVSLGCAFYPTPDNPFTLNAADSL 443

Query: 502 LYLSKSKGRNRVSIAQQC 519
           +Y +K KG+N+    + C
Sbjct: 444 MYEAKRKGKNQAVFREFC 461