Pairwise Alignments

Query, 537 a.a., sensor domain-containing diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 320 a.a., cyclic nucleotide phosphodiesterase, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 94.0 bits (232), Expect = 8e-24
 Identities = 69/204 (33%), Positives = 99/204 (48%), Gaps = 18/204 (8%)

Query: 339 LEEKQRLTDMIEERTAELRYLVEHDSLTNIYNRR-FFSQHLCKMLDEKQSFTLISFDIDR 397
           + +++++ + + E  +    L   D LT +YNRR FF+  L       Q+   I FDIDR
Sbjct: 122 ITDRKQMEEALIEAKSTAERLANTDELTKLYNRRAFFNLGLSIAQQSGQALAFIMFDIDR 181

Query: 398 FKQINDSYGHLAGDYALTHVVDVVKKELVESDIFARFGGDEFAILSSVTDETALYTYLER 457
           FK +ND +GH  GD AL H+  + +  L   DI  R GG+EF IL             E 
Sbjct: 182 FKHVNDRWGHTTGDAALIHIAKLTQAILKPVDILGRLGGEEFGILLPDLHHEQACQLAES 241

Query: 458 IRKVVEAEPVMLNAETPLTLTISIG-ASINCE--YSEPE-------ILQSVDDQLYLSKS 507
           IR   E +P+ LN +  +  T S G ASI     +SE E       +  S D  +  +K 
Sbjct: 242 IRCRFEEQPLALNGQI-IKCTASFGIASITIPVIHSEKEAQNLLETLFNSADQAMMQAKR 300

Query: 508 KGRNRVSIAQQCSKVE-SNYAFNS 530
            GRN+V     CS  E +N+A N+
Sbjct: 301 NGRNQV-----CSATELANFAQNN 319