Pairwise Alignments

Query, 537 a.a., sensor domain-containing diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 487 a.a., GGDEF domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  107 bits (266), Expect = 1e-27
 Identities = 76/251 (30%), Positives = 123/251 (49%), Gaps = 20/251 (7%)

Query: 287 KIERKLVLPNRDWVLEFELHQPINHSEEWVLLGLGLGGVI---ISLLLSYIMRMQLEEKQ 343
           ++ R  V   R   L  +   P+  +   ++L LG G      I++ L+    +  ++ Q
Sbjct: 228 RLARHDVAEYRTTALTHDEPSPLPEAGRVMMLPLGNGKNTFGAIAMALAETPALGKDQAQ 287

Query: 344 RLTDMIEERTAELRYLV---------EHDSLTNIYNRRFFSQHLCKMLDEKQSF----TL 390
            L  ++   T  LR  V         +HD+LT ++NRR F   L + +D  Q +    TL
Sbjct: 288 ALDSVMRHLTLALRNAVVYREIKLQADHDALTQLHNRRSFDHRLAEEVDRHQRYGMPMTL 347

Query: 391 ISFDIDRFKQINDSYGHLAGDYALTHVVDVVKKELVESDIFARFGGDEFAILSSVTDETA 450
           +  DID FK +ND+YGH AGD  L  V   ++     +D  AR+GG+EF ++   TD   
Sbjct: 348 LMLDIDHFKAVNDTYGHPAGDAVLREVAQTMRNACRTTDFAARYGGEEFCVILPHTDGKC 407

Query: 451 LYTYLERIRKVVEAEPVMLNAETPLTLTISIG---ASINCEYSEPEILQSVDDQLYLSKS 507
              + ER+RK + +  V ++ +T + +T+SIG    S     S   ++   D  LY +K+
Sbjct: 408 GRIFAERLRKRLASSRVEVDGKT-IAVTVSIGLATLSAAAPLSPERLVCEADGALYAAKA 466

Query: 508 KGRNRVSIAQQ 518
            GRN V  AQ+
Sbjct: 467 AGRNIVCEAQE 477