Pairwise Alignments

Query, 948 a.a., molecular chaperone DnaK from Vibrio cholerae E7946 ATCC 55056

Subject, 639 a.a., molecular chaperone DnaK (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 53.5 bits (127), Expect = 4e-11
 Identities = 106/470 (22%), Positives = 174/470 (37%), Gaps = 102/470 (21%)

Query: 13  LVGIDLGTTNTVVAFCELSDA----------LEQAPIEIFPVDQLIGP---GEVVRRPLL 59
           ++GIDLGTTN+ V   E  D              + +     ++L+G     + V  P  
Sbjct: 4   IIGIDLGTTNSCVYVMEGKDPKCITNPEGGRTTPSIVAFTDKERLVGDIAKRQAVTNPER 63

Query: 60  PSFRYHPSHGQFTDSDLTLPWSSELVEGDLPQVIIGEWARDLGAKVEGRQVSSAKSWLSH 119
             F      G+  D+     W +       P  I+     D   +V+GRQ S+A+     
Sbjct: 64  TVFAVKRLMGRKGDAPEVNNWKTHS-----PYRIVAGANGDAAVEVQGRQYSAAE----- 113

Query: 120 PNVDRTQPILPWAGASDVEKVSPIVASASYLNHIRQAWNHRHPLNPLEQQEVVITVPASF 179
                         A  + K+     + +YL                   + VITVPA F
Sbjct: 114 ------------VSAMILGKLK--ADAEAYLGET--------------VTDAVITVPAYF 145

Query: 180 DETARKLTLEAARLAGLSNIMLLEEPQAVCYDWHHRHQTQANEILHASPLILVCDVGGGT 239
           ++  R+ T +A R+AGL    ++ EP A    +    +T           I V D+GGGT
Sbjct: 146 NDAQRQATKDAGRIAGLDVKRIINEPTAASLAYGFDRKTNEK--------IAVFDLGGGT 197

Query: 240 TDLSLIAAQFDAQAALQLNRIGVGDHLMLGGDNIDLALAHVAERRFNQNKKLSAAGLSKL 299
            D+S++    +       N    GD   LGG++ D  + +     F +   +  +     
Sbjct: 198 FDISILEVGDNVVEVRATN----GD-TFLGGEDFDQRVINYLVEEFRRENGVDLSKDRMA 252

Query: 300 IQQTRQAKESL---LSADAPEQMK---ITLLGSGSKLLGGTQSVALHRDEVHQIALDGFF 353
           +Q+ ++A E     LS     ++    IT   +G K L     + L R ++ ++  D   
Sbjct: 253 LQRLKEAAEKAKKDLSTSMETEINLPFITADQNGPKHL----MMKLSRAKLEKLVED--- 305

Query: 354 PLTQRDVLPEKRRSAVVEFGLPYAS------------DPAVSKHIAEFLSHHQGVVPSDP 401
            L  R +  E  R A+ + GL  A              P V K + EF          +P
Sbjct: 306 -LVDRTI--EPCRKALADAGLSAAQIDEVVLVGGMTRMPLVQKKVGEFFG-------KEP 355

Query: 402 NTEPNTVSTDLLPTAL---LLNGGVFNSSLITQRLIALLSDWLGRPITLL 448
           N   N      +  A+   +L G V +  L+    ++L  + LG   T L
Sbjct: 356 NRSVNPDEVVAMGAAIQGGILAGDVKDVLLLDVTPLSLGIETLGGVFTRL 405