Pairwise Alignments

Query, 948 a.a., molecular chaperone DnaK from Vibrio cholerae E7946 ATCC 55056

Subject, 620 a.a., chaperone protein HscA (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 59.7 bits (143), Expect = 6e-13
 Identities = 79/313 (25%), Positives = 122/313 (38%), Gaps = 53/313 (16%)

Query: 11  RFLVGIDLGTTNTVVAFCELSDALEQAPIEIFPVDQLIGPGEVVRRPLLPSFRYHPSHGQ 70
           R  VGIDLGTTN++VA                     +  G     P        PS  +
Sbjct: 19  RLAVGIDLGTTNSLVA--------------------AVRSGVTATLPDENGQHSLPSIVR 58

Query: 71  FTDSDLTLPWSSELVEGDLPQVIIGEWARDLGAKVEGRQVSSAKSWLSHPNVDRTQPILP 130
           +T   + + + + +     P+  I    R +G  +   Q             +   P+  
Sbjct: 59  YTQEGIEVGYVAAMSSAQDPKNTIVSVKRFMGRSLTDIQSGEQSFPYQFEASENGLPLF- 117

Query: 131 WAGASDVEKVSPIVASASYLNHIRQAWNHRHPLNPLEQQEVVITVPASFDETARKLTLEA 190
               +    V+P+  SA  L   R            E Q  VITVPA FD+  R+ T +A
Sbjct: 118 ---VTPQGLVNPVQVSAEIL---RPLIERAEKTLGGELQGAVITVPAYFDDAQRQGTKDA 171

Query: 191 ARLAGLSNIMLLEEPQAVCYDWHHRHQTQANEILHASPLILVCDVGGGTTDLSLIAAQFD 250
           A L G+  + LL EP A    +    + +         +I + D+GGGT D+S+      
Sbjct: 172 ASLLGVKVLRLLNEPTAAAIAYGLDSKQEG--------VIAIYDLGGGTFDISI------ 217

Query: 251 AQAALQLNR-----IGVGDHLMLGGDNID-LALAHVAERRFNQNKKLSAAGLSKLIQQTR 304
               L+LNR     +  G    LGGD+ D L  AH+ +    Q   + +    +L+ + R
Sbjct: 218 ----LRLNRGVFEVLATGGDSALGGDDFDHLLQAHMLQ--VWQLTDIDSQLSRQLLIEAR 271

Query: 305 QAKESLLSADAPE 317
           + KE+L  A   E
Sbjct: 272 RVKEALTYASDTE 284