Pairwise Alignments

Query, 948 a.a., molecular chaperone DnaK from Vibrio cholerae E7946 ATCC 55056

Subject, 638 a.a., chaperone protein dnaK (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 55.1 bits (131), Expect = 1e-11
 Identities = 46/155 (29%), Positives = 70/155 (45%), Gaps = 16/155 (10%)

Query: 167 EQQEVVITVPASFDETARKLTLEAARLAGLSNIMLLEEPQAVCYDWHHRHQTQANEILHA 226
           E  E VITVPA F ++ R+ T EA ++AGL    ++ EP A    +         +  H 
Sbjct: 132 EVTEAVITVPAYFSDSQRQATKEAGQIAGLEVKRIVNEPTAAALAY-------GLDKAHK 184

Query: 227 SPLILVCDVGGGTTDLSLIAAQFDAQAALQLNRIGVGDHLMLGGDNIDLALAHVAERRFN 286
              I V D+GGGT D+S++         L  N    GD   LGGD+ D  + +   + F 
Sbjct: 185 DMKIAVFDLGGGTFDISILEFGGGVFEVLSTN----GD-THLGGDDFDQVIINWLVQEFK 239

Query: 287 QNKKLSAA----GLSKLIQQTRQAKESLLSADAPE 317
            ++          L +L +   +AK  L S+ + E
Sbjct: 240 NDEGADLTQDPMALQRLKEAAEKAKIELSSSTSTE 274



 Score = 26.6 bits (57), Expect = 0.005
 Identities = 11/17 (64%), Positives = 14/17 (82%)

Query: 13 LVGIDLGTTNTVVAFCE 29
          ++GIDLGTTN+ VA  E
Sbjct: 4  IIGIDLGTTNSCVAVFE 20