Pairwise Alignments

Query, 392 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 556 a.a., Probable two-component response regulator from Pseudomonas fluorescens FW300-N2E2

 Score =  101 bits (252), Expect = 5e-26
 Identities = 56/162 (34%), Positives = 89/162 (54%), Gaps = 6/162 (3%)

Query: 228 RLRSIQDELTGAFNRRHFKEQVQQ---KLKQSKQKSMVALVDIDHFKQINDSYGHDIGDS 284
           + R ++D LTG +N  H  + ++    + ++  +    A++DIDHFK++NDS+GH +GD 
Sbjct: 373 KARMVRDSLTGLYNHTHILQLLEDCSFRARREGKPLSFAMLDIDHFKRVNDSHGHPMGDR 432

Query: 285 VITYVVRHLESLALTECLVARYGGEEFAIFARENDFERVSQALDSVRDAISVGFHVEQQP 344
           VI  +   L+        + RYGGEEFAI   + D +   + LD +R   +   H   QP
Sbjct: 433 VIKSLALFLKQRLRKTDFIGRYGGEEFAIVMPDTDIDAACKVLDEIRQRFA-EIHYPAQP 491

Query: 345 LKVSVSIGAVIFESSHEYGEVL--RQADKALYQAKQQGRNRI 384
             +  +  A + E S +   ++   QAD+ALY+AK  GRNRI
Sbjct: 492 HDLWCTFSAGVVEMSDDSDSLMMASQADEALYRAKHAGRNRI 533