Pairwise Alignments

Query, 392 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 586 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Pseudomonas fluorescens FW300-N2E2

 Score =  110 bits (276), Expect = 8e-29
 Identities = 67/176 (38%), Positives = 101/176 (57%), Gaps = 8/176 (4%)

Query: 220 LFEEIEWHRLRSIQDELTGAFNRRHFKEQVQQKLKQSKQKSM---VALVDIDHFKQINDS 276
           L   ++W   R   D LTG  NR +  + + Q L+ S+ +++   V ++D+D FK +ND 
Sbjct: 124 LLHSLQW---RVGHDVLTGLPNRTYLSDLLDQALEFSRAENLPLAVCMLDLDGFKAVNDG 180

Query: 277 YGHDIGDSVITYVVRHLESLALTECLVARYGGEEFAIFARE-NDFERVSQALDSVRDAIS 335
           YGH  GD ++  V R L S+   E +VAR GG+EF +  R     + +  AL  V  A+S
Sbjct: 181 YGHASGDRLLVEVARRLRSIVRGEDVVARLGGDEFVLVLRHVRGMDELHAALSRVLIAVS 240

Query: 336 VGFHVEQQPLKVSVSIGAVIFESSHEYGE-VLRQADKALYQAKQQGRNRIMLQDVS 390
           + + ++ + +KV  SIG  +F   +E  E +LR AD+A+Y AKQ GRNR  L DVS
Sbjct: 241 MPYGIDGKGIKVFASIGVTLFPWDNEDAETLLRHADQAMYVAKQSGRNRFHLFDVS 296