Pairwise Alignments

Query, 392 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 317 a.a., diguanylate cyclase (GGDEF domain) with PAS/PAC sensor from Pseudomonas fluorescens FW300-N2E2

 Score =  100 bits (250), Expect = 4e-26
 Identities = 53/166 (31%), Positives = 97/166 (58%), Gaps = 5/166 (3%)

Query: 228 RLRSIQDELTGAFNRRHFKEQVQQKLKQSKQKS---MVALVDIDHFKQINDSYGHDIGDS 284
           +L S  D LTG +NR H++  ++    + ++      + ++DIDHFK++ND+YGH  GD 
Sbjct: 152 QLLSSTDRLTGLYNRGHWESDLKAAYARHQRYGHALSLVMLDIDHFKRVNDTYGHQAGDK 211

Query: 285 VITYVVRHLESLALTECLVARYGGEEFAIFARENDFERVSQALDSVRDAI-SVGFHVEQQ 343
           VI  V R L   A    +V RYGGEEF +   + D        + +R ++ ++      Q
Sbjct: 212 VIEQVARLLREHARDSDVVGRYGGEEFGVVLSDTDSSGAHAFAERMRHSVEALEVLYNDQ 271

Query: 344 PLKVSVSIG-AVIFESSHEYGEVLRQADKALYQAKQQGRNRIMLQD 388
            ++ ++S+G A + + S+++ +++ +AD+ALY +K+ GRNR+ + +
Sbjct: 272 TIRFTISLGVADLSQPSNDHADLIARADQALYTSKKTGRNRVTVHE 317