Pairwise Alignments

Query, 392 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 397 a.a., diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

 Score = 93.2 bits (230), Expect = 1e-23
 Identities = 54/169 (31%), Positives = 94/169 (55%), Gaps = 12/169 (7%)

Query: 230 RSIQDELTGAFNRRHFKEQVQQKLKQSKQKS---MVALVDIDHFKQINDSYGHDIGDSVI 286
           ++I+D LTG F+R   +E ++ +   +++K+    +A +D+DHFK IND++GH+ GD V+
Sbjct: 224 QAIRDPLTGVFSRGSGEEILRLQWDSAQRKNGALALAFIDLDHFKTINDNHGHEAGDQVL 283

Query: 287 TYVVRHLESLALTECLVARYGGEEFAIFARENDFERVSQALDSVRDAISVGFHVEQQP-- 344
               R L +       + R+GGEEF +   + D  +  QAL+ +     VG  + Q+P  
Sbjct: 284 REAARRLVAALRASDSLLRWGGEEFLLIMPDTDMLQARQALERI-----VGQGLGQRPDG 338

Query: 345 --LKVSVSIGAVIFESSHEYGEVLRQADKALYQAKQQGRNRIMLQDVSA 391
             L  S+ +     +   +Y ++L  ADK +Y+AK  GRNR+ + +  A
Sbjct: 339 AALTASIGLAERRCDQVADYRDLLELADKRMYRAKTSGRNRLCVMEPEA 387