Pairwise Alignments

Query, 392 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1037 a.a., diguanylate cyclase (GGDEF domain) with PAS/PAC sensor from Synechococcus elongatus PCC 7942

 Score =  107 bits (268), Expect = 1e-27
 Identities = 61/165 (36%), Positives = 90/165 (54%), Gaps = 7/165 (4%)

Query: 234  DELTGAFNRRHFKEQVQQKLK-----QSKQKSMVALVDIDHFKQINDSYGHDIGDSVITY 288
            D LTG  NRR F    Q +L      Q      + ++DIDHFK INDSYGH +GD V+  
Sbjct: 868  DALTGILNRRQFITLAQAELNRIYRIQRDTSLSLVIIDIDHFKTINDSYGHTVGDQVLIL 927

Query: 289  VVRHLESLALTECLVARYGGEEFAIFARENDFERVSQALDSVRD-AISVGFHVEQQPLKV 347
                 +       + AR GG+EF +   E + ++  Q +D +R   I    H+ QQ + +
Sbjct: 928  WTNICQQNIREVDIFARLGGDEFVLMLPETNGKQAYQVMDRIRQLVIQQSLHLPQQAIAI 987

Query: 348  SVSIGAVIFESS-HEYGEVLRQADKALYQAKQQGRNRIMLQDVSA 391
            ++S+G  ++        + L +AD+ALYQAKQQGR+RI+L D S+
Sbjct: 988  TISVGIAVWTPEILTLDQFLERADRALYQAKQQGRDRIILLDTSS 1032