Pairwise Alignments

Query, 392 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 624 a.a., GGDEF domain-containing protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  105 bits (261), Expect = 5e-27
 Identities = 93/333 (27%), Positives = 159/333 (47%), Gaps = 38/333 (11%)

Query: 84  YQLGGYCMLFAVLRWYQKPIKSGLYLLMMAHSLLFALLLYLLFRLNPEDIGLRILIASLS 143
           Y L  YC L A+L         G+ ++++A +L+ AL    L RL    +G  + +AS+ 
Sbjct: 298 YSLAMYCDLVALL---------GIAVVLLAFALVQALRGQKLARLY--FVGWIVFLASVI 346

Query: 144 LSSVYLISAIVAAKNGQRGRPEQTLFAVV-LAMMMVMLY---------VPFVAYQTLPLL 193
           ++S+  + AI               F +V +++++ + Y         +   A +    +
Sbjct: 347 VTSLIYLGAIQTTMEPLSPAMAGVTFEIVFMSLVLAIRYSDERKAKQRIQQEALEQAKRI 406

Query: 194 AVFRASTIVVQ-----NLFFFIILGTMLMLFLFEEIEWHRLRSIQ----DELTGAFNRRH 244
              R   + V+      L   +   T+ +  +  E+     +  +    D LTG  NR  
Sbjct: 407 REAREEALKVEAESNERLEEMVQERTLELEIVLRELNEVNQKLTEQTTIDSLTGVKNRAA 466

Query: 245 FKEQVQQKLKQSKQKSM---VALVDIDHFKQINDSYGHDIGDSVITYVVRHLES-LALTE 300
           F +++Q + + S+++     + ++DIDHFK IND YGH  GD  +  +   L + L    
Sbjct: 467 FNKRLQAEGRISRRQQTPMALLMLDIDHFKNINDKYGHLAGDYTLKAIADTLSAQLRRPT 526

Query: 301 CLVARYGGEEFAIFARENDFERVSQALDSVRDAI---SVGFHVEQQPLKVSVSIGAVIFE 357
            LV+R+GGEEFAI     D E      + +R+A+   ++ +     PL VS+ + + I E
Sbjct: 527 DLVSRFGGEEFAIILPSTDAEGAVAVAEHIREAVEELTIKWEQFMIPLTVSIGVSSNIIE 586

Query: 358 SSHEYGEVLRQADKALYQAKQQGRNRI-MLQDV 389
           S     ++L QADKALYQAK  GRNR+ + QD+
Sbjct: 587 SDEHPLQLLEQADKALYQAKHDGRNRVGLFQDI 619