Pairwise Alignments

Query, 392 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 557 a.a., diguanylate cyclase (RefSeq) from Shewanella amazonensis SB2B

 Score =  105 bits (262), Expect = 3e-27
 Identities = 79/278 (28%), Positives = 129/278 (46%), Gaps = 29/278 (10%)

Query: 116 LLFALLLYLLFRLNPEDIGLRILIASLSLSSVYLISAIVAAKNGQRGRPEQTLFAVVLAM 175
           L+FA     +F L    +G+   +  L  + ++L++++             T+       
Sbjct: 301 LIFAFDFVYIFTLLMPLLGILAWLHGLPTARLFLLASL------------STMVGSCTTG 348

Query: 176 MMVMLYVPFVAYQTLPLLAVFRASTIVVQNLFFFIILGTMLMLFLFEEIEWHRLRSIQ-- 233
           + V  Y+ F  +        +RA+ I    +F   +L  + +   F + E  R+ + Q  
Sbjct: 349 LAVEGYISFNQW-------TYRAAEI---GMFIDAMLLALALAAQFRQSEQERVLAQQLA 398

Query: 234 --DELTGAFNRRHFKEQVQQKLKQSKQKSMVALV--DIDHFKQINDSYGHDIGDSVITYV 289
             D LTG  NRR F EQ+Q+      Q+   AL+  DID FK IND+ GH++GD V+T +
Sbjct: 399 ATDPLTGIANRRAFSEQLQRLWHLDSQRRCRALIMIDIDRFKSINDTLGHEVGDKVLTDI 458

Query: 290 VRHLESLALTECLVARYGGEEFAIFARENDFERVSQALDSVRDAI-SVGFHVEQQPLKVS 348
            R +           R+GGEEF +       E      + +R  I S+ F      LKV+
Sbjct: 459 ARVIRYSIRNRDQCGRWGGEEFVVLLASASEEEAGIIAERIRHNIESLSFPAPANKLKVT 518

Query: 349 VSIGAVIFESSHEYGEVLRQADKALYQAKQQGRNRIML 386
            S+G  + E    + ++LR+AD+A+Y AK  G NR+ L
Sbjct: 519 ASVGVCLDEGHSRHEDILRRADEAMYHAKDAGGNRVKL 556